Evidence map›Paper›PMID 38038129›Full record

ArticleThe Journal of clinical investigation2023

CRISPR screening identifies the deubiquitylase ATXN3 as a PD-L1-positive regulator for tumor immune evasion.

Shengnan Wang, Radhika Iyer, Xiaohua Han, Juncheng Wei, Na Li, Yang Cheng, Yuanzhang Zhou, Qiong Gao, Lingqiang Zhang, Ming Yan and 2 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Review
  3. Loss of NCCRP1 overcomes immune evasion in lung adenocarcinoma.Journal for immunotherapy of cancer · 2026
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  12. JUNB and JUND in Urological Cancers: A Literature Review.Current issues in molecular biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Shengnan WangDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Radhika IyerDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Xiaohua HanDepartment of Physiology, School of Basic Medicine, Qingdao University, Qingdao, Shandong, China.
Juncheng WeiDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Na LiCollege of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Yang ChengDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Yuanzhang ZhouCollege of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Qiong GaoDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Lingqiang ZhangState Key Laboratory of Proteomics, National Center of Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing, China.
Ming YanDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Zhaolin SunCollege of Basic Medical Sciences, Dalian Medical University, Dalian, China.
Deyu FangDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Northwestern University · USDalian Medical University · CNBeijing Proteome Research Center · CNQingdao University · CN

Funding

Novel Role of Hepatic SEL1L-HRD1 ERAD in FGF21 Gene TranscriptionR01DK120330 · NIDDK · UNIVERSITY OF VIRGINIA · PI Deyu Fang, Ling Qi · 2018 to 2026
$4.9M
A deubiquitination module controls Treg adaptation to tumor microenvironmentR01CA257520 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI FANG, DEYU, ZHANG, BIN · 2021 to 2025
$2.8M
Regulation of Rhythmic m6A RNA Modification by ER‐associated DegradationR01DK126908 · NIDDK · WAYNE STATE UNIVERSITY · PI FANG, DEYU, ZHANG, KEZHONG · 2021 to 2024
$2.2M
Targeting a Treg deubiquitinase in antitumor immune therapyR01CA232347 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI FANG, DEYU · 2018 to 2022
$1.7M
NCI NIH HHS R01 CA232347NCI NIH HHS R01 CA257520NIDDK NIH HHS R01 DK120330NIDDK NIH HHS R01 DK126908
6 · The paper itself

Abstract

Regulation of tumoral PD-L1 expression is critical to advancing our understanding of tumor immune evasion and the improvement of existing antitumor immunotherapies. Herein, we describe a CRISPR-based screening platform and identified ATXN3 as a positive regulator for PD-L1 transcription. TCGA database analysis revealed a positive correlation between ATXN3 and CD274 in more than 80% of human cancers. ATXN3-induced Pd-l1 transcription was promoted by tumor microenvironmental factors, including the inflammatory cytokine IFN-γ and hypoxia, through protection of their downstream transcription factors IRF1, STAT3, and HIF-2α. Moreover, ATXN3 functioned as a deubiquitinase of the AP-1 transcription factor JunB, indicating that ATNX3 promotes PD-L1 expression through multiple pathways. Targeted deletion of ATXN3 in cancer cells largely abolished IFN-γ- and hypoxia-induced PD-L1 expression and consequently enhanced antitumor immunity in mice, and these effects were partially reversed by PD-L1 reconstitution. Furthermore, tumoral ATXN3 suppression improved the preclinical efficacy of checkpoint blockade antitumor immunotherapy. Importantly, ATXN3 expression was increased in human lung adenocarcinoma and melanoma, and its levels were positively correlated with PD-L1 as well as its transcription factors IRF1 and HIF-2α. Collectively, our study identifies what we believe to be a previously unknown deubiquitinase, ATXN3, as a positive regulator for PD-L1 transcription and provides a rationale for targeting ATXN3 to sensitize checkpoint blockade antitumor immunotherapy.

Indexed as

Lung NeoplasmsTumor EscapeAnimalsAtaxin-3B7-H1 AntigenBasic Helix-Loop-Helix ProteinsCell Line, TumorDeubiquitinating EnzymesHumansHypoxiaImmunotherapyMiceRepressor ProteinsTranscription FactorsTumor MicroenvironmentAtaxin-3ATXN3 protein, humanB7-H1 AntigenBasic Helix-Loop-Helix ProteinsDeubiquitinating EnzymesRepressor ProteinsTranscription FactorsImmunotherapyLung cancerOtologyUbiquitin-proteosome system

Identifiers

PMID38038129
PMCPMC10688982
OpenAlexW4389166336

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.