Evidence map›Paper›PMID 36950910›Full record

ArticleJournal of materials chemistry. B2023

Visible label-free detection of bacterial DNA using flocculation of sterically stabilised cationic latexes.

Elisabeth Trinh, Kate L Thompson, Shang-Pin Wen, Gavin J Humphreys, Bianca L Price, Lee A Fielding

Abstract read
In one paragraph

Article in Journal of materials chemistry. B, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Elisabeth TrinhDepartment of Materials, School of Natural Sciences, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK. lee.fielding@mancheter.ac.uk.ORCID 0000-0002-5062-4992
Kate L ThompsonDepartment of Materials, School of Natural Sciences, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK. lee.fielding@mancheter.ac.uk.
Shang-Pin WenDepartment of Materials, School of Natural Sciences, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK. lee.fielding@mancheter.ac.uk.
Gavin J HumphreysDivision of Pharmacy and Optometry, School of Health Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK.
Bianca L PriceDivision of Pharmacy and Optometry, School of Health Sciences, Faculty of Biology Medicine and Health, The University of Manchester, Oxford Road, Manchester, M13 9PT, UK.
Lee A FieldingDepartment of Materials, School of Natural Sciences, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK. lee.fielding@mancheter.ac.uk.ORCID 0000-0002-4958-1155

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current gold standard diagnostic for bacterial infections is the use of culture, which can be time consuming and can take up to five days for results to be reported. There is therefore an unmet clinical need for a rapid and label free alternative. This paper demonstrates a method of detecting the presence of amplified DNA from bacterial samples using a sterically-stabilised, cationic polymer latex and widely available equipment, providing an accessible alternative DNA detection technique. If DNA is present in a sample, successful amplification by polymerase chain-reaction (PCR) results in the amplified DNA inducing flocculation of the polymer latex followed by rapid sedimentation. This results in a visible and obvious change from a milky-white dispersion to a precipitated latex with a colourless and transparent supernatant, thus giving a clear visual indication of the presence or absence of amplified DNA. Specifically, the response of four polymer latexes with different morphologies to the addition of amplified bacterial DNA was investigated. Cationic latexes flocculated rapidly whereas non-ionic and anionic latexes did not, as judged by eye, disc centrifuge photosedimentometry (DCP), and UV-visible spectrophotometry. The stability of several cationic latexes with different morphologies in typical PCR reagents was investigated. It was found that unwanted flocculation occurred for a latex with a non-ionic core and a cationic corona (poly[2-vinyl pyridine-

Indexed as

LatexPolymersDNA, BacterialEmulsionsMethacrylatesDNA, BacterialEmulsionsLatexMethacrylatesPolymers

Identifiers

PMID36950910
PMCPMC10155078

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.