Evidence map›Paper›PMID 35659248›Full record

ArticleBMC microbiology2022

Microbial diversity composition of apple tree roots and resistance of apple Valsa canker with different grafting rootstock types.

Jianxun Wang, Ruolin Wang, Feng Kang, Xia Yan, Ling Sun, Nana Wang, Yufeng Gong, Xiaoning Gao, Lili Huang

Abstract read
In one paragraph

Article in BMC microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  10. Microorganisms · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jianxun WangCollege of Life Science, Northwest A&F University, Yangling, 712100, China.
Ruolin WangCollege of Life Science, Northwest A&F University, Yangling, 712100, China.
Feng KangCollege of Life Science, Northwest A&F University, Yangling, 712100, China.
Xia YanCollege of Life Science, Northwest A&F University, Yangling, 712100, China. yan-xia@nwafu.edu.cn.
Ling SunCollege of Life Science, Northwest A&F University, Yangling, 712100, China.
Nana WangCollege of Life Science, Northwest A&F University, Yangling, 712100, China.
Yufeng GongPlant Protection and Inspection Station, Mizhi County, Shaanxi Province, Yulin, 718100, China.
Xiaoning GaoState Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China.
Lili HuangState Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China. huanglili@nwafu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe composition and diversity of root microbial community are affected by plant genotypes and soil environment, which in turn affect plant growth and development. Grafting rootstock types of the apple tree can affect phenotypes in cultivation practice, but it is not clear whether grafting rootstock types can affect the composition and diversity of root microbial community and the resistance of apple tree to apple Valsa canker.

methodsTo explore root microbial differences and the correlation, 16S rRNA and ITS genes were sequenced using Novaseq technology.

resultsThe results showed that the influence of grafting rootstock types on the composition of the root fungal community was greater than that of bacteria. And the bacterial community richness was higher in the healthy (OTUs: 1693) and dwarfing rootstock (OTUs: 1526) than in the disease (OTUs: 1181) and standard rootstock (OTUs: 1412), while the fungal community richness was the opposite. Moreover, the bacterial abundance of root zone, rhizosphere, and root endophytic microorganisms with the same grafting rootstock type exhibited a decreasing trend. Results of Nested PCR assay on soil and root tissue of Valsa mali showed that the content of V. mali in dwarfing rootstocks are lower than standard rootstocks. These results suggest that apple trees grafting with dwarfing rootstocks are more resistant to V. mali than standard rootstocks.

conclusionsUnder different grafting types, the effect on the composition of fungal community in apple tree root was greater than that of bacteria. The bacterial community in dwarfing rootstocks is more abundant and diverse, including more beneficial microorganisms. Therefore, dwarfing rootstock is more conducive to the resistance to apple Valsa canker from biological control.

Indexed as

MalusBacteriaPlant RootsRhizosphereRNA, Ribosomal, 16SSoilRNA, Ribosomal, 16SSoilApple Valsa cankerGrafting rootstock typesRoots microbiomeValsa mali

Identifiers

PMID35659248
PMCPMC9164711

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.