Evidence map›Paper›PMID 30116836›Full record

ArticleCurrent microbiology2018

Robust Domination of Lactobacillus sakei in Microbiota During Traditional Japanese Sake Starter Yamahai-Moto Fermentation and the Accompanying Changes in Metabolites.

Atsushi Tsuji, Miyuki Kozawa, Koji Tokuda, Toshiki Enomoto, Takashi Koyanagi

Abstract read
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In one paragraph

Article in Current microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Comparative genomic analysis ofMicrobiology (Reading, England) · 2025
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  5. Lot-to-lot variation in the microbiota during the brewing process ofBioscience of microbiota, food and health · 2024
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  6. Article
  7. Article
  8. International journal of molecular sciences · 2023
    Article
  9. A dark matter inFrontiers in microbiology · 2023
    Article
  10. Phylogenomic analysis inBioscience of microbiota, food and health · 2023
    Article
  11. The microbiome of Chinese rice wine (Huangjiu).Current research in food science · 2022
    Review
  12. Frontiers in nutrition · 2022
    Article
  13. Diversity ofMicroorganisms · 2021
    Article
  14. Article
  15. Article
  16. Genomic information ofAIMS microbiology · 2021
    Article
  17. Microbial Dynamics in Traditional and Modern Sour Beer Production.Applied and environmental microbiology · 2020
    Review
  18. Review
  19. Co-fermentation InvolvingFrontiers in microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Atsushi TsujiIndustrial Research Institute of Ishikawa, Kanazawa, Ishikawa, 920-8203, Japan.
Miyuki KozawaShata-Shuzo Co., Ltd., Hakusan, Ishikawa, 924-0823, Japan.
Koji TokudaShata-Shuzo Co., Ltd., Hakusan, Ishikawa, 924-0823, Japan.
Toshiki EnomotoDepartment of Food Science, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi, Ishikawa, 921-8836, Japan.
Takashi KoyanagiDepartment of Food Science, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi, Ishikawa, 921-8836, Japan. koyataka@ishikawa-pu.ac.jp.
Ishikawa Prefectural University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The successful production of sake (Japanese rice wine) is brought about by drastic changes in microbial flora and chemical components during fermentation. In the traditional manufacturing process of sake starter (yamahai-moto), spontaneous growth of lactic acid bacteria suppresses inappropriate microorganisms and prepares the optimum environment for the alcohol fermentative yeast. In this study, we analyzed the changes in bacterial flora and chemical components of yamahai-moto. High-throughput next-generation sequencing (NGS) of the 16S ribosomal RNA gene V4 region revealed that various kinds of bacteria, including nitrate-reducing bacteria, existed in the early fermentation stage; however, Lactobacillus sakei then increased drastically to become dominant in the middle stage. Interestingly, this result was different from that obtained in the previous year at the same manufacturer; the early-stage major bacterium was Lactobacillus acidipiscis. Lactic acid, glucose, isomaltose, and total free amino acids increased throughout the fermentation process, which was attributable to the metabolism of L. sakei and the koji mold. It is noteworthy that significant ornithine accumulation and arginine consumption were observed from the middle to late stages. Thirty-eight percent of the L. sakei isolates from yamahai-moto exhibited significant ornithine production, indicating that the arginine deiminase pathway of L. sakei was working to survive the extremely low pH environment of the moto after the middle stage. This is the first report that includes concurrent analyses of the NGS-based bacterial flora and chemical components of yamahai-moto, providing further knowledge to help understand and improve the process of sake brewing.

Indexed as

MicrobiotaBacteriaFermentationFungiHigh-Throughput Nucleotide SequencingLatilactobacillus sakeiOryzaWine

Identifiers

PMID30116836
OpenAlexW2887627190

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.