Evidence map›Paper›PMID 29515543›Full record

ArticleFrontiers in microbiology2018

Evolution of Phototrophy in the Chloroflexi Phylum Driven by Horizontal Gene Transfer.

Lewis M Ward, James Hemp, Patrick M Shih, Shawn E McGlynn, Woodward W Fischer

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  13. The biotechnological potential of theApplied and environmental microbiology · 2024
    Review
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lewis M WardDivision of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, United States.
James HempDepartment of Gastroenterology, University of Utah School of Medicine, Salt Lake City, UT, United States.
Patrick M ShihDepartment of Energy, Joint BioEnergy Institute, Emeryville, CA, United States.
Shawn E McGlynnEarth-Life Science Institute, Tokyo Institute of Technology, Meguro, Japan.
Woodward W FischerDivision of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolutionary mechanisms behind the extant distribution of photosynthesis is a point of substantial contention. Hypotheses range from the presence of phototrophy in the last universal common ancestor and massive gene loss in most lineages, to a later origin in Cyanobacteria followed by extensive horizontal gene transfer into the extant phototrophic clades, with intermediate scenarios that incorporate aspects of both end-members. Here, we report draft genomes of 11 Chloroflexi: the phototrophic Chloroflexia isolate

Indexed as

comparative genomicslateral gene transfermicrobial diversitymicrobial metabolismphylogenetics

Identifiers

PMID29515543
PMCPMC5826079

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.