Evidence map›Paper›PMID 25697791›Full record

ArticleJournal of experimental botany2015

The identification of new cytosolic glutamine synthetase and asparagine synthetase genes in barley (Hordeum vulgare L.), and their expression during leaf senescence.

Liliana Avila-Ospina, Anne Marmagne, Joël Talbotec, Karin Krupinska, Céline Masclaux-Daubresse

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
19.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 94 citations in OpenAlex.

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  14. Review
  15. Cereal asparagine synthetase genes.The Annals of applied biology · 2021
    Article
  16. Article
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  18. Review
  19. Asparagine Synthesis During Tobacco Leaf Curing.Plants (Basel, Switzerland) · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Liliana Avila-OspinaINRA, UMR1318, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France.
Anne MarmagneINRA, UMR1318, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France.
Joël TalbotecINRA, UMR1318, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France.
Karin KrupinskaInstitute of Botany, Christian-Albrechts-University of Kiel, Olshausenstraße 40, D-24098 Kiel, Germany.
Céline Masclaux-DaubresseINRA, UMR1318, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France celine.masclaux@versailles.inra.fr.
AgroParisTech · FRInstitut Jean-Pierre Bourgin · FRKiel University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutamine synthetase and asparagine synthetase are two master enzymes involved in ammonium assimilation in plants. Their roles in nitrogen remobilization and nitrogen use efficiency have been proposed. In this report, the genes coding for the cytosolic glutamine synthetases (HvGS1) and asparagine synthetases (HvASN) in barley were identified. In addition to the three HvGS1 and two HvASN sequences previously reported, two prokaryotic-like HvGS1 and three HvASN cDNA sequences were identified. Gene structures were then characterized, obtaining full genomic sequences. The response of the five HvGS1 and five HvASN genes to leaf senescence was then studied. Developmental senescence was studied using primary and flag leaves. Dark-exposure or low-nitrate conditions were also used to trigger stress-induced senescence. Well-known senescence markers such as the chlorophyll and Rubisco contents were monitored in order to characterize senescence levels in the different leaves. The three eukaryotic-like HvGS1_1, HvGS1_2, and HvGS1_3 sequences showed the typical senescence-induced reduction in gene expression described in many plant species. By contrast, the two prokaryotic-like HvGS1_4 and HvGS1_5 sequences were repressed by leaf senescence, similar to the HvGS2 gene, which encodes the chloroplast glutamine synthetase isoenzyme. There was a greater contrast in the responses of the five HvASN and this suggested that these genes are needed for N remobilization in senescing leaves only when plants are well fertilized with nitrate. Responses of the HvASN sequences to dark-induced senescence showed that there are two categories of asparagine synthetases, one induced in the dark and the other repressed by the same conditions.

Indexed as

Gene Expression Regulation, PlantAspartate-Ammonia LigaseCellular SenescenceChlorophyllCytosolDNA, ComplementaryGlutamate-Ammonia LigaseHordeumNitratesNitrogenPlant LeavesPlant ProteinsRibulose-Bisphosphate CarboxylaseAspartate-Ammonia LigaseChlorophyllDNA, ComplementaryGlutamate-Ammonia LigaseNitratesNitrogenPlant ProteinsRibulose-Bisphosphate CarboxylaseAsparagine synthetasedark treatmentendoproteaseglutamine synthetasenitrate.

Identifiers

PMID25697791
PMCPMC4378633
OpenAlexW2137393779

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.