Evidence map›Paper›PMID 25495746›Full record

ArticleBMC microbiology2014

Hepadnavirus detected in bile and liver samples from domestic pigs of commercial abattoirs.

Yasmine Rangel Vieira, Debora Regina Lopes dos Santos, Moyra Machado Portilho, Carlos Eduardo Pereira Velloso, Marcia Arissawa, Livia Melo Villar, Marcelo Alves Pinto, Vanessa Salete de Paula

Abstract read
In one paragraph

Article in BMC microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Evaluation of HBV-Like Circulation in Wild and Farm Animals from Brazil and Uruguay.International journal of environmental research and public health · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yasmine Rangel VieiraLaboratório de Desenvolvimento Tecnológico em Virologia, Pavilhão Hélio e Peggy Pereira - 2° andar - sala B220, Instituto Oswaldo Cruz, FIOCRUZ, Av, Brasil, n° 4365, Manguinhos - RJ, Rio de Janeiro, Cep: 21045-900, RJ, Brasil. yasminerangel@ig.com.br.
Debora Regina Lopes dos Santos
Moyra Machado Portilho
Carlos Eduardo Pereira Velloso
Marcia Arissawa
Livia Melo Villar
Marcelo Alves Pinto
Vanessa Salete de Paula

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPreliminary studies showed the prevalence of a virus similar to human hepatitis B virus (HBV-like) in swine from farms in China and the molecular evidence of Hepadnavirus infection in domestic pigs herds in Brazil. In this study, we genetically characterize the swine Hepadnavirus strains in swine from slaughterhouses located in certified abattoirs from Rio de Janeiro State, Brazil and evaluate its hepatotropic potential.

resultsBile and liver samples from swine were positive for partial genome amplification (ORF S and ORF C), direct sequencing and viral load quantification. Sequencing of the gene encoding the surface antigen allowed classification of Hepadnavirus into genotypes, similar to HBV genotype classification. Indirect immunofluorescence confirmed the presence of HBsAg antigen in liver tissue sections.

conclusionsSo far our data suggest that commercial swine house an HBV-like virus and this relevant finding should be considered in studies on the origin and viral evolution.

Indexed as

AbattoirsAnimalsBileBrazilGenotypeHepadnaviridaeLiverMolecular Sequence DataPolymerase Chain ReactionSequence Analysis, DNASequence HomologySus scrofaViral Load

Identifiers

PMID25495746
PMCPMC4269919

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.