Evidence map›Paper›PMID 23615277›Full record

ArticleDevelopment (Cambridge, England)2013

A novel chemical screening strategy in zebrafish identifies common pathways in embryogenesis and rhabdomyosarcoma development.

Xiuning Le, Emily K Pugach, Simone Hettmer, Narie Y Storer, Jianing Liu, Airon A Wills, Antony DiBiase, Eleanor Y Chen, Myron S Ignatius, Kenneth D Poss and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Future Match Making: When Pediatric Oncology Meets Organoid Technology.Frontiers in cell and developmental biology · 2021
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Machine learning and image-based profiling in drug discovery.Current opinion in systems biology · 2018
    Review
  12. Article
  13. Zebrafish as a Model Organism for the Development of Drugs for Skin Cancer.International journal of molecular sciences · 2017
    Review
  14. Article
  15. Frontiers in oncology · 2017
    Review
  16. Review
  17. Article
  18. Identifying Novel Cancer Therapies Using Chemical Genetics and Zebrafish.Advances in experimental medicine and biology · 2016
    Review
  19. Review
  20. Zebrafish as tools for drug discovery.Nature reviews. Drug discovery · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Xiuning LeStem Cell Program and Division of Hematology/Oncology, Children's Hospital and Dana Farber Cancer Institute, Howard Hughes Medical Institute, Harvard Stem Cell Institute, Harvard Medical School, Boston, MA 02115, USA.
Emily K Pugach
Simone Hettmer
Narie Y Storer
Jianing Liu
Airon A Wills
Antony DiBiase
Eleanor Y Chen
Myron S Ignatius
Kenneth D Poss
Amy J Wagers
David M Langenau
Leonard I Zon
Harvard Stem Cell Institute · USDana-Farber Cancer Institute · USHarvard University · USHoward Hughes Medical Institute · USDuke University Hospital · USMassachusetts General Hospital · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
CORE--ZEBRAFISHP30DK049216 · NIDDK · CHILDREN'S HOSPITAL BOSTON · PI ZHOU, YI · 1999 to 2015
$14.3M
Tissue and Pathology ResourcesU54CA168512 · NCI · SARC · PI REINKE, DENISE · 2012 to 2016
$11.0M
Cancer Biology in the ZebrafishR01CA103846 · NCI · CHILDREN'S HOSPITAL BOSTON · PI ZON, LEONARD IRA · 2003 to 2022
$7.5M
Regulation of Myocardial Regeneration in ZebrafishR01HL081674 · NHLBI · DUKE UNIVERSITY · PI POSS, KENNETH D · 2005 to 2019
$6.6M
Genetics of RhabdomyosarcomaR01CA154923 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LANGENAU, DAVID MICHAEL · 2011 to 2021
$3.8M
Regulation of Appendage Regeneration in ZebrafishR01GM074057 · NIGMS · DUKE UNIVERSITY · PI POSS, KENNETH D · 2006 to 2017
$3.7M
Control of HSC proliferation and migration by the transcription factor EGR1R01HL088582 · NHLBI · JOSLIN DIABETES CENTER · PI WAGERS, AMY JO · 2009 to 2013
$2.2M
Chemical Inhibitors of Rhabdomyosarcoma Self-RenawalR21CA156056 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LANGENAU, DAVID MICHAEL · 2011 to 2012
$417k
Howard Hughes Medical InstituteNCI NIH HHS 1U54CA168512NCI NIH HHS 5 R01 CA103846-10NCI NIH HHS R01 CA103846NCI NIH HHS R01 CA154923NCI NIH HHS R01CA154923NCI NIH HHS R21 CA156056NCI NIH HHS R21CA156056NCI NIH HHS U54 CA168512NHLBI NIH HHS HL081674NHLBI NIH HHS R01 HL081674NHLBI NIH HHS R01 HL088582NHLBI NIH HHS R01 HL088582-01S1NIAMS NIH HHS K01AR05562190NIDDK NIH HHS P30 DK049216NIGMS NIH HHS GM074057NIGMS NIH HHS R01 GM074057NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

The zebrafish is a powerful genetic model that has only recently been used to dissect developmental pathways involved in oncogenesis. We hypothesized that operative pathways during embryogenesis would also be used for oncogenesis. In an effort to define RAS target genes during embryogenesis, gene expression was evaluated in Tg(hsp70-HRAS(G12V)) zebrafish embryos subjected to heat shock. dusp6 was activated by RAS, and this was used as the basis for a chemical genetic screen to identify small molecules that interfere with RAS signaling during embryogenesis. A KRAS(G12D)-induced zebrafish embryonal rhabdomyosarcoma was then used to assess the therapeutic effects of the small molecules. Two of these inhibitors, PD98059 and TPCK, had anti-tumor activity as single agents in both zebrafish embryonal rhabdomyosarcoma and a human cell line of rhabdomyosarcoma that harbored activated mutations in NRAS. PD98059 inhibited MEK1 whereas TPCK suppressed S6K1 activity; however, the combined treatment completely suppressed eIF4B phosphorylation and decreased translation initiation. Our work demonstrates that the activated pathways in RAS induction during embryogenesis are also important in oncogenesis and that inhibition of these pathways suppresses tumor growth.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, NeoplasticSignal TransductionAnimalsAnimals, Genetically ModifiedCell Line, TumorEukaryotic Initiation FactorsFlavonoidsHumansMAP Kinase Kinase 1Oligonucleotide Array Sequence AnalysisProtein Biosynthesisras ProteinsRhabdomyosarcomaRibosomal Protein S6 KinasesTosylphenylalanyl Chloromethyl Ketone2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-oneeIF-4BEukaryotic Initiation FactorsFlavonoidsMAP Kinase Kinase 1ras ProteinsRibosomal Protein S6 KinasesTosylphenylalanyl Chloromethyl KetoneZebrafish ProteinsEmbryogenesisRASRhabdomyosarcomaTranslational controlZebrafish

Identifiers

PMID23615277
PMCPMC3653557
OpenAlexW1995182386

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.