Evidence map›Paper›PMID 21750191›Full record

ArticleJournal of cell science2011

Banf1 is required to maintain the self-renewal of both mouse and human embryonic stem cells.

Jesse L Cox, Sunil K Mallanna, Briana D Ormsbee, Michelle Desler, Matthew S Wiebe, Angie Rizzino

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The missing linkGenes & development · 2021
    Review
  10. Review
  11. Article
  12. Survival ofDevelopment (Cambridge, England) · 2020
    Article
  13. Article
  14. RareFrontiers in cell and developmental biology · 2019
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jesse L CoxEppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, Omaha, NE 68198-6805, USA.
Sunil K Mallanna
Briana D Ormsbee
Michelle Desler
Matthew S Wiebe
Angie Rizzino
University of Nebraska Medical Center · USUniversity of Nebraska–Lincoln · US

Funding

UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Apar Kishor Ganti · 1985 to 2026
$55.0M
Regulation of Growth Factors and EmbryogenesisR01GM080751 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI RIZZINO, A. ANGIE · 2007 to 2010
$1.2M
NCI NIH HHS CA 36727NCI NIH HHS P30 CA036727NIGMS NIH HHS GM 080751NIGMS NIH HHS R01 GM080751
6 · The paper itself

Abstract

Self-renewal is a complex biological process necessary for maintaining the pluripotency of embryonic stem cells (ESCs). Recent studies have used global proteomic techniques to identify proteins that associate with the master regulators Oct4, Nanog and Sox2 in ESCs or in ESCs during the early stages of differentiation. Through an unbiased proteomic screen, Banf1 was identified as a Sox2-associated protein. Banf1 has been shown to be essential for worm and fly development but, until now, its role in mammalian development and ESCs has not been explored. In this study, we examined the effect of knocking down Banf1 on ESCs. We demonstrate that the knockdown of Banf1 promotes the differentiation of mouse ESCs and decreases the survival of both mouse and human ESCs. For mouse ESCs, we demonstrate that knocking down Banf1 promotes their differentiation into cells that exhibit markers primarily associated with mesoderm and trophectoderm. Interestingly, knockdown of Banf1 disrupts the survival of human ESCs without significantly reducing the expression levels of the master regulators Sox2, Oct4 and Nanog or inducing the expression of markers of differentiation. Furthermore, we determined that the knockdown of Banf1 alters the cell cycle distribution of both human and mouse ESCs by causing an uncharacteristic increase in the proportion of cells in the G2-M phase of the cell cycle.

Indexed as

AnimalsBlotting, WesternCell CycleCell LineDNA-Binding ProteinsEmbryonic Stem CellsHEK293 CellsHomeodomain ProteinsHumansImmunohistochemistryMiceNuclear ProteinsOctamer Transcription Factor-3SOXB1 Transcription FactorsBANF1 protein, humanBanf1 protein, mouseDNA-Binding ProteinsHomeodomain ProteinsNuclear ProteinsOctamer Transcription Factor-3SOXB1 Transcription Factors

Identifiers

PMID21750191
PMCPMC3138706
OpenAlexW2160358287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.