Evidence map›Paper›PMID 17304215›Full record

ArticleThe EMBO journal2007

Fission yeast Swi5/Sfr1 and Rhp55/Rhp57 differentially regulate Rhp51-dependent recombination outcomes.

Yufuko Akamatsu, Yasuhiro Tsutsui, Takashi Morishita, Md Shahjahan P Siddique, Yumiko Kurokawa, Mitsunori Ikeguchi, Fumiaki Yamao, Benoit Arcangioli, Hiroshi Iwasaki

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 84 citations in OpenAlex.

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  12. Two auxiliary factors promote Dmc1-driven DNA strand exchange via stepwise mechanisms.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yufuko AkamatsuInternational Graduate School of Arts and Sciences, Yokohama City University, Yokohama, Kanagawa, Japan.
Yasuhiro Tsutsui
Takashi Morishita
Md Shahjahan P Siddique
Yumiko Kurokawa
Mitsunori Ikeguchi
Fumiaki Yamao
Benoit Arcangioli
Hiroshi Iwasaki
Yokohama City University · JPNational Institute of Genetics · JPInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several accessory proteins referred to as mediators are required for the full activity of the Rad51 (Rhp51 in fission yeast) recombinase. In this study, we analyzed in vivo functions of the recently discovered Swi5/Sfr1 complex from fission yeast. In normally growing cells, the Swi5-GFP protein localizes to the nucleus, where it forms a diffuse nuclear staining pattern with a few distinct foci. These spontaneous foci do not form in swi2Delta mutants. Upon UV irradiation, Swi5 focus formation is induced in swi2Delta mutants, a response that depends on Sfr1 function, and Sfr1 also forms foci that colocalize with damage-induced Rhp51 foci. The number of UV-induced Rhp51 foci is partially reduced in swi5Delta and rhp57Delta mutants and completely abolished in an swi5Delta rhp57Delta double mutant. An assay for products generated by HO endonuclease-induced DNA double-strand breaks (DSBs) reveals that Rhp51 and Rhp57, but not Swi5/Sfr1, are essential for crossover production. These results suggest that Swi5/Sfr1 functions as an Rhp51 mediator but processes DSBs in a manner different from that of the Rhp55/57 mediator.

Indexed as

Recombination, GeneticAdenosine TriphosphatasesCell NucleusChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA DamageDNA, FungalDNA RepairGreen Fluorescent ProteinsHeterochromatinMicroscopy, FluorescenceProtein BindingRad51 RecombinaseSchizosaccharomycesSchizosaccharomyces pombe ProteinsAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA, FungalGreen Fluorescent ProteinsHeterochromatinRad51 RecombinaseRHP51 protein, S pombeRHP55 protein, S pombeRhp57 protein, S pombeSchizosaccharomyces pombe ProteinsSfr1 protein, S pombeSwi5 protein, S pombeSwi6 protein, S pombe

Identifiers

PMID17304215
PMCPMC1817630
OpenAlexW2066527798

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.