Evidence map›Paper›PMID 9990078›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

In vivo transposition of mariner-based elements in enteric bacteria and mycobacteria.

E J Rubin, B J Akerley, V N Novik, D J Lampe, R N Husson, J J Mekalanos

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 202 papers.

0numbers the graph read from it
0cells of the map it votes in
202citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

202 citing papers in PubMed, 359 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Bacteriophage genome-wide transposon mutagenesis.bioRxiv : the preprint server for biology · 2025
    Article
  5. Review
  6. Stimulation of themBio · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Frontiers in microbiology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Pathogens (Basel, Switzerland) · 2023
    Article

142 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

E J RubinDepartment of Microbiology and Molecular Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA 02115, USA.
B J Akerley
V N Novik
D J Lampe
R N Husson
J J Mekalanos
Harvard University · USDuquesne University · US

Funding

COORDINATE REGULATION OF BACTERIAL VIRULENCE FACTORSR01AI026289 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MEKALANOS, JOHN JOSEPH · 1988 to 2018
$8.3M
MYCOBACTERIAL SIGMA FACTORSR01AI037901 · NIAID · CHILDREN'S HOSPITAL BOSTON · PI HUSSON, ROBERT N · 1995 to 2011
$3.4M
MARINER TRANSPOSONS AS GENETIC TOOLS FOR INSECTSR01AI033586 · NIAID · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI ROBERTSON, HUGH M. · 1994 to 2000
$162k
NIAID NIH HHS AI02137NIAID NIH HHS AI33586NIAID NIH HHS AI37901NIAID NIH HHS R01 AI026289NIAID NIH HHS R01 AI037901
6 · The paper itself

Abstract

mariner family transposons are widespread among eukaryotic organisms. These transposons are apparently horizontally transmitted among diverse eukaryotes and can also transpose in vitro in the absence of added cofactors. Here we show that transposons derived from the mariner element Himar1 can efficiently transpose in bacteria in vivo. We have developed simple transposition systems by using minitransposons, made up of short inverted repeats flanking antibiotic resistance markers. These elements can efficiently transpose after expression of transposase from an appropriate bacterial promoter. We found that transposition of mariner-based elements in Escherichia coli produces diverse insertion mutations in either a targeted plasmid or a chromosomal gene. With Himar1-derived transposons we were able to isolate phage-resistant mutants of both E. coli and Mycobacterium smegmatis. mariner-based transposons will provide valuable tools for mutagenesis and genetic manipulation of bacteria that currently lack well developed genetic systems.

Indexed as

DNA Transposable ElementsBacteriophage lambdaBase SequenceConjugation, GeneticCyanobacteriaDNA-Binding ProteinsEscherichia coliMutagenesis, InsertionalMycobacterium smegmatisMycobacterium tuberculosisOpen Reading FramesPlasmidsPolymerase Chain ReactionPromoter Regions, GeneticRhodobacter capsulatusStreptomycesDNA-Binding ProteinsDNA Transposable Elementsmariner transposasesTransposases

Identifiers

PMID9990078
PMCPMC15546
OpenAlexW1996001643

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.