Evidence map›Paper›PMID 9973341›Full record

ArticleJournal of bacteriology1999

The signal transduction protein GlnK is required for NifL-dependent nitrogen control of nif gene expression in Klebsiella pneumoniae.

R Jack, M De Zamaroczy, M Merrick

Abstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Nitrogenase regulation inbioRxiv : the preprint server for biology · 2026
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  12. Crystal structure of the archaeal ammonium transporter Amt-1 from Archaeoglobus fulgidus.Proceedings of the National Academy of Sciences of the United States of America · 2005
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

R JackNitrogen Fixation Laboratory, John Innes Centre, Norwich NR4 7UH, United Kingdom.
M De Zamaroczy
M Merrick

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Klebsiella pneumoniae, transcription of the nitrogen fixation (nif) genes is regulated in response to molecular oxygen or availability of fixed nitrogen by the coordinated activities of the nifA and nifL gene products. NifA is a nif-specific transcriptional activator, the activity of which is inhibited by interaction with NifL. Nitrogen control of NifL occurs at two levels: transcription of the nifLA operon is regulated by the global ntr system, and the inhibitory activity of NifL is controlled in response to fixed nitrogen by an unknown factor. K. pneumoniae synthesizes two PII-like signal transduction proteins, GlnB, which we have previously shown not to be involved in the response of NifL to fixed nitrogen, and the recently identified protein GlnK. We have now cloned the K. pneumoniae glnK gene, studied its expression, and shown that a null mutation in glnK prevents NifL from responding to the absence of fixed nitrogen, i.e., from relieving the inhibition of NifA activity. Hence, GlnK appears to be involved, directly or indirectly, in NifL-dependent regulation of nif gene expression in K. pneumoniae. Comparison of the GlnB and GlnK amino acid sequences from six species of proteobacteria identifies five residues (residues 3, 5, 52, 54, and 64) which serve to distinguish the GlnB and GlnK proteins.

Indexed as

Gene Expression Regulation, BacterialGenes, BacterialAmino Acid SequenceBacterial ProteinsBase SequenceCarrier ProteinsCloning, MolecularGene ExpressionKlebsiella pneumoniaeMolecular Sequence DataMutationNitrogenNitrogen FixationPhenotypePII Nitrogen Regulatory ProteinsRNA, BacterialBacterial ProteinsCarrier ProteinsGlnK protein, Azorhizobium caulinodansnifL protein, BacteriaNitrogenPIID regulatory protein, BacteriaPII Nitrogen Regulatory ProteinsRNA, BacterialRNA, Messenger

Identifiers

PMID9973341
PMCPMC93492

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.