Evidence map›Paper›PMID 9971770›Full record

ArticleJournal of virology1999

Kaposi's sarcoma-associated herpesvirus encodes a bZIP protein with homology to BZLF1 of Epstein-Barr virus.

S F Lin, D R Robinson, G Miller, H J Kung

Abstract read
In one paragraph

Article in Journal of virology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed.

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  11. In Vitro SUMOylation Assay to Study SUMO E3 Ligase Activity.Journal of visualized experiments : JoVE · 2018
    Article
  12. Viral manipulation of the cellular sumoylation machinery.Cell communication and signaling : CCS · 2017
    Review
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  14. Article
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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

S F LinDepartment of Molecular Biology and Microbiology, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44016, USA.
D R Robinson
G Miller
H J Kung

Funding

ONCOGENE ACTIVATION IN BANDT LYMPHOMAR37CA046613 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI KUNG, HSING-JIEN · 1993 to 2000
$321k
ONCOGENE ACTIVATION IN AVIAN B &T LYMPHOMAR01CA046613 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI KUNG, HSING-JIEN · 1988 to 1992
–
NCI NIH HHS CA46613
6 · The paper itself

Abstract

Kaposi's sarcoma-associated herpesvirus (KSHV) is a recently discovered human gamma herpesvirus strongly implicated in AIDS-related neoplasms. We report here the identification in the KSHV genome of a gene for a protein designated K-bZIP and belonging to the basic-leucine zipper (bZIP) family of transcription factors. K-bZIP shows significant homology to BZLF1, which plays a key role in the replication and reactivation of Epstein-Barr virus. K-bZIP is a homodimerizing protein of 237 amino acids with a prototypic bZIP domain at the C terminus. The N-terminal portion of K-bZIP is derived from the K8 open reading frame which, through in-frame splicing, adjoins the ZIP domain. This structure was revealed by rapid analysis of cDNA ends, followed by cloning of the entire cDNA. A 1.35-kb transcript encoding K-bZIP was detected in BCBL-1 cells treated with 12-O-tetradecanoylphorbol-13-acetate. The synthesis of this transcript was blocked by the protein synthesis inhibitor cycloheximide but not by the viral DNA synthesis inhibitor phosphonoacetate, a result which classifies it as an early lytic gene. RNase protection analysis further mapped the major transcription start site for the 1.35-kb K-bZIP mRNA and identified two other splice variants which encode proteins with the N-terminal portion of K-bZIP but lacking the C-terminal ZIP domain. Full-length K-bZIP forms dimers with itself, and the C terminus encompassing the ZIP domain is required for this process. Our studies set the stage for understanding the role of K-bZIP in the replication and reactivation of the KSHV genome.

Indexed as

Viral ProteinsAmino Acid SequenceBase SequenceBasic-Leucine Zipper Transcription FactorsCloning, MolecularDimerizationDNA-Binding ProteinsG-Box Binding FactorsHerpesvirus 8, HumanHumansMolecular Sequence DataOpen Reading FramesTrans-ActivatorsTranscription FactorsTranscription, GeneticBasic-Leucine Zipper Transcription FactorsBZLF1 protein, Herpesvirus 4, HumanDNA-Binding ProteinsG-Box Binding FactorsTrans-ActivatorsTranscription FactorsViral Proteins

Identifiers

PMID9971770
PMCPMC104432

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.