Evidence map›Paper›PMID 9927657›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

U1 small nuclear RNA and spliceosomal introns in Euglena gracilis.

D G Breckenridge, Y Watanabe, S J Greenwood, M W Gray, M N Schnare

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

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  11. A possible role for short introns in the acquisition of stroma-targeting peptides in the flagellate Euglena gracilis.DNA research : an international journal for rapid publication of reports on genes and genomes · 2010
    Article
  12. Article
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  15. Article
  16. A spliceosomal intron in Giardia lamblia.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  17. Spliceosomal introns in a deep-branching eukaryote: the splice of life.Proceedings of the National Academy of Sciences of the United States of America · 2002
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  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

D G BreckenridgeProgram in Evolutionary Biology, Canadian Institute for Advanced Research, Department of Biochemistry, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada.
Y Watanabe
S J Greenwood
M W Gray
M N Schnare
Dalhousie University · CACanadian Institute for Advanced Research · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the flagellated protozoon Euglena gracilis, characterized nuclear genes harbor atypical introns that usually are flanked by short repeats, adopt complex secondary structures in pre-mRNA, and do not obey the GT-AG rule of conventional cis-spliced introns. In the nuclear fibrillarin gene of E. gracilis, we have identified three spliceosomal-type introns that have GT-AG consensus borders. Furthermore, we have isolated a small RNA from E. gracilis and propose, on the basis of primary and secondary structure comparisons, that it is a homolog of U1 small nuclear RNA, an essential component of the cis-spliceosome in higher eukaryotes. Conserved sequences at the 5' splice sites of the fibrillarin introns can potentially base pair with Euglena U1 small nuclear RNA. Our observations demonstrate that spliceosomal GT-AG cis-splicing occurs in Euglena, in addition to the nonconventional cis-splicing and spliced leader trans-splicing previously recognized in this early diverging unicellular eukaryote.

Indexed as

AnimalsBase PairingBase SequenceConserved SequenceDNA, ComplementaryEuglena gracilisIntronsMolecular Sequence DataNucleic Acid ConformationPolymerase Chain ReactionRNA, ProtozoanRNA, Small NuclearSpliceosomesDNA, ComplementaryRNA, ProtozoanRNA, Small Nuclear

Identifiers

PMID9927657
PMCPMC15314
OpenAlexW1992008554

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.