Evidence map›Paper›PMID 9916112›Full record

ArticleInfection and immunity1999

Cloning of the gene encoding the Actinobacillus actinomycetemcomitans serotype b OmpA-like outer membrane protein.

H Komatsuzawa, T Kawai, M E Wilson, M A Taubman, M Sugai, H Suginaka

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Molecular Analysis ofPathogens (Basel, Switzerland) · 2024
    Article
  2. Frontiers in immunology · 2019
    Review
  3. OC-STAMP promotes osteoclast fusion for pathogenic bone resorption in periodontitis via up-regulation of permissive fusogen CD9.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2018
    Article
  4. Macrophage Migration Inhibitory Factor (MIF) Supports Homing of Osteoclast Precursors to Peripheral Osteolytic Lesions.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2016
    Article
  5. Article
  6. Modulation of connexin signaling by bacterial pathogens and their toxins.Cellular and molecular life sciences : CMLS · 2011
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

H KomatsuzawaDepartment of Microbiology, Hiroshima University School of Dentistry, Hiroshima, 734-8553 Japan. hkomatsu@ipc.hiroshima-u.ac.jp
T Kawai
M E Wilson
M A Taubman
M Sugai
H Suginaka
Hiroshima University · JPNovant Health Forsyth Medical Center · USRutgers, The State University of New Jersey · US

Funding

REGULATORY CELLS IN EXPERIMENTAL PERIODONTAL DISEASER01DE003420 · NIDCR · FORSYTH INSTITUTE · PI KAWAI, TOSHIHISA · 1985 to 2012
$4.3M
IGG SUBCLASS RESPONSE TO A ACTINOMYCETEMCOMITANSR01DE010041 · NIDCR · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI WILSON, MARK E · 1992 to 1998
–
REGULATORY CELLS IN EXPERIMENTAL PERIODONTAL DISEASER37DE003420 · NIDCR · FORSYTH INSTITUTE · PI TAUBMAN, MARTIN A · 1990 to 1999
–
NIDCR NIH HHS DE-03420NIDCR NIH HHS DE-10041NIDCR NIH HHS R01 DE003420NIDCR NIH HHS R37 DE003420
6 · The paper itself

Abstract

The gene encoding an outer membrane protein A (OmpA)-like, heat-modifiable Omp of Actinobacillus actinomycetemcomitans ATCC 43718 (strain Y4, serotype b) was cloned by a PCR cloning procedure. DNA sequence analysis revealed that the gene encodes a protein of 346 amino acid residues with a molecular mass of 36.9 kDa. The protein expressed by the cloned gene reacted with a monoclonal antibody to the previously described 29-kDa Omp (Omp29) of strain Y4. This monoclonal antibody reacted specifically with Omp29 of A. actinomycetemcomitans (serotype b), but not with any Omp of Escherichia coli, including OmpA. This protein exhibited characteristic heat modifiability on sodium dodecyl sulfate-polyacrylamide gels, showing an apparent molecular mass of 29 kDa when unheated and a mass of 34 kDa when heated. The N-terminal amino acid sequence of the protein expressed in E. coli perfectly matched those deduced from the purified Omp29 of strain Y4. The deduced amino acid sequence of the gene coding for Omp29 from serotype b matched completely (except for valine at position 321) that of a recently reported omp34 gene described for A. actinomycetemcomitans serotype c (NCTC 9710). Because of the conserved nature of the gene within these serotypes, we designated the gene described herein from serotype b as omp34.

Indexed as

Aggregatibacter actinomycetemcomitansAmino Acid SequenceAnimalsBacterial Outer Membrane ProteinsBase SequenceCloning, MolecularDNA, BacterialEscherichia coliGene ExpressionGenes, BacterialMiceMice, Inbred BALB CMolecular Sequence DataBacterial Outer Membrane ProteinsDNA, BacterialOmp29 protein, Actinobacillus actinomycetemcomitansOMPA outer membrane proteins

Identifiers

PMID9916112
PMCPMC96408
OpenAlexW2171560086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.