Evidence map›Paper›PMID 9915959›Full record

ArticleAmerican journal of human genetics1999

Genome scan for human obesity and linkage to markers in 20q13.

J H Lee, D R Reed, W D Li, W Xu, E J Joo, R L Kilker, E Nanthakumar, M North, H Sakul, C Bell and 1 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
12.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 239 citations in OpenAlex.

  1. Trial
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  8. Genomics of body fat distribution.Journal of genetics · 2021
    Review
  9. Polymorphisms and mutations in the melanocortin-3 receptor and their relation to human obesity.Biochimica et biophysica acta. Molecular basis of disease · 2017
    Review
  10. Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

J H LeeCenter for Neurobiology and Behavior, Department of Psychiatry, University of Pennsylvania, Philadelphia, USA.
D R Reed
W D Li
W Xu
E J Joo
R L Kilker
E Nanthakumar
M North
H Sakul
C Bell
R A Price
University of Pennsylvania · US

Funding

GENETIC STUDIES OF OBESITYR01DK044073 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI PRICE, R ARLEN · 1991 to 2008
$3.8M
GENETIC STUDIES OF OBESITY IN AFRICAN AMERICAN WOMENR01DK048095 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI PRICE, R. ARLEN · 1995 to 1999
–
GENETIC LINKAGE STUDIES OF BITTER TASTE PERCEPTIONR03DC003509 · NIDCD · UNIVERSITY OF PENNSYLVANIA · PI REED, DANIELLE RENEE · 1997 to 1999
–
NIDCD NIH HHS R03DC03509NIDDK NIH HHS R01DK44073NIDDK NIH HHS R01DK48095
6 · The paper itself

Abstract

Obesity is a highly prevalent, multigenic trait that predicts increased morbidity and mortality. Here we report results from a genome scan based on 354 markers in 513 members of 92 nuclear families ascertained through extreme obesity and normal body weight. The average marker interval was approximately 10 cM. We examined four correlated obesity phenotypes, including the body-mass index (BMI) (both as a quantitative trait and as a discrete trait with a threshold of BMI > or /=30 kg/m2) and percentage of fat (both as a quantitative trait and as a discrete trait with a threshold of 40%) as assessed by bioelectrical impedance. In the initial stage of the genome scan, four markers in 20q gave positive evidence for linkage, which was consistent across most obesity phenotypes and analytic methods. After saturating 20q with additional markers (25 markers total) in an augmented sample of 713 members from 124 families, we found linkage to several markers in a region, 20q13, previously implicated in both human and animal studies. Three markers (D20S107, D20S211, and D20S149) in 20q13 had empirical P values (based on Monte Carlo simulations, which controlled for multiple testing) < or /=. 01 for single-point analysis. In addition, the parametric, affecteds-only analysis for D20S476 yielded a LOD score of 3.06 (P=. 00009), and the affected-sib-pair test yielded a LOD score of 3.17 (P=.000067). Multipoint analyses further strengthened and localized these findings. This region includes several plausible candidate genes for obesity. Our results suggest that one or more genes affecting obesity are located in 20q13.

Indexed as

Chromosomes, Human, Pair 20Genetic LinkageGenetic MarkersBlack PeopleChromosome BandingChromosome MappingGene FrequencyGenotypeHumansLod ScoreObesityPhenotypeQuantitative Trait, HeritableSoftwareWhite PeopleGenetic Markers

Identifiers

PMID9915959
PMCPMC1377718
OpenAlexW2092966600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.