Evidence map›Paper›PMID 9891062›Full record

ArticleMolecular and cellular biology1999

p53-mediated repression of alpha-fetoprotein gene expression by specific DNA binding.

K C Lee, A J Crowe, M C Barton

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 185 citations in OpenAlex.

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  10. Mechanisms of transcriptional regulation by p53.Cell death and differentiation · 2018
    Review
  11. Article
  12. Article
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  14. The MDM2-p53 pathway: multiple roles in kidney development.Pediatric nephrology (Berlin, Germany) · 2014
    Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

K C LeeDepartment of Molecular Genetics, Biochemistry, and Microbiology, University of Cincinnati, Cincinnati, Ohio 45267-0524, USA.
A J Crowe
M C Barton
University of Cincinnati · US

Funding

In Vitro Reconstitution of Alpha Fetroprotein RegulationR01GM053683 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BARTON, MICHELLE ANN · 1997 to 2007
$1.6M
DNA REPLICATION AS A MEDIATOR OF TUMORIGENIC ACTIVATIONF32CA073083 · NCI · UNIVERSITY OF CINCINNATI · PI CROWE, ALISON J · 1997 to 1998
–
NCI NIH HHS CA73083NCI NIH HHS F32 CA073083NIGMS NIH HHS GM53683NIGMS NIH HHS R01 GM053683
6 · The paper itself

Abstract

Aberrant expression of the alpha-fetoprotein (AFP) gene is characteristic of a majority of hepatocellular carcinoma cases and serves as a diagnostic tumor-specific marker. By dissecting regulatory mechanisms through electromobility gel shift, transient-transfection, Western blot, and in vitro transcription analyses, we find that AFP gene expression is controlled in part by mutually exclusive binding of two trans-acting factors, p53 and hepatic nuclear factor 3 (HNF-3). HNF-3 protein activates while p53 represses AFP transcription through sequence-specific binding within the previously identified AFP developmental repressor domain. A single mutation within the DNA binding domain of p53 protein or a mutation of the p53 DNA binding element within the AFP developmental repressor eliminates p53-repressive effects in both transient-transfection and cell-free expression systems. Coexpression of p300 histone acetyltransferase, which has been shown to acetylate p53 and increase specific DNA binding, amplifies the p53-mediated repression. Western blot analysis of proteins present in developmentally staged, liver nuclear extracts reveal a one-to-one correlation between activation of p53 protein and repression of AFP during hepatic development. Induction of p53 in response to actinomycin D or hypoxic stress decreases AFP expression. Studies in fibroblast cells lacking HNF-3 further support a model for p53-mediated repression that is both passive through displacement of a tissue-specific activating factor and active in the presence of tissue-specific corepressors. This mechanism for p53-mediated repression of AFP gene expression may be active during hepatic differentiation and lost in the process of tumorigenesis.

Indexed as

Transcription Factorsalpha-FetoproteinsAnimalsBase SequenceBinding SitesCarcinoma, HepatocellularCell HypoxiaDNA-Binding ProteinsDNA DamageDNA, NeoplasmDNA PrimersGene Expression Regulation, DevelopmentalHepatocyte Nuclear Factor 3-alphaHumansLiver NeoplasmsMicealpha-FetoproteinsDNA-Binding ProteinsDNA, NeoplasmDNA PrimersFOXA1 protein, humanFoxa1 protein, mouseHepatocyte Nuclear Factor 3-alphaNuclear ProteinsRepressor ProteinsTranscription FactorsTumor Suppressor Protein p53

Identifiers

PMID9891062
PMCPMC116057
OpenAlexW2121673811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.