Evidence map›Paper›PMID 9889190›Full record

ArticleThe EMBO journal1999

Inhibition of apoptosis and clonogenic survival of cells expressing crmA variants: optimal caspase substrates are not necessarily optimal inhibitors.

P G Ekert, J Silke, D L Vaux

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The enigma of caspase-2: the laymen's view.Cell death and differentiation · 2009
    Review
  6. Determination of cell survival by RING-mediated regulation of inhibitor of apoptosis (IAP) protein abundance.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  7. Specificity and reactive loop length requirements for crmA inhibition of serine proteases.Protein science : a publication of the Protein Society · 2005
    Article
  8. Article
  9. Article
  10. Article
  11. Neuroprotection and acute spinal cord injury: a reappraisal.NeuroRx : the journal of the American Society for Experimental NeuroTherapeutics · 2004
    Review
  12. A decade of caspases.Oncogene · 2003
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P G EkertThe Walter and Eliza Hall Institute of Medical Research, Post Office Royal Melbourne Hospital, Victoria 3050, Australia.
J Silke
D L Vaux
The Royal Melbourne Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To study the role of various caspases during apoptosis, we have designed a series of caspase inhibitors based on the cowpox virus cytokine response modifier A (crmA) protein. Wild-type crmA inhibits caspases 1 and 8 and thereby protects cells from apoptosis triggered by ligation of CD95 or tumour necrosis factor (TNF) receptors, but it does not protect against death mediated by other caspases. By replacing the tetrapeptide pseudosubstrate region of crmA (LVAD) with tetrapeptides that are optimal substrates for the different families of caspases, or with the four residues from the cleavage site of the baculovirus protein p35 (DQMD), we have generated a family of caspase inhibitors that show altered ability to protect against cell death. Although DEVD is the optimal substrate for caspase 3, crmA DEVD was degraded rapidly and was a weaker inhibitor than crmA DQMD, which was not degraded. Unlike wild-type crmA and crmA DEVD, crmA DQMD was able to inhibit apoptosis caused by direct activation of caspase 3 and protected lymphoid cells from death induced by radiation and dexamethasone. Significantly, the protected cells were capable of sustained growth.

Indexed as

Caspase InhibitorsViral ProteinsAmino Acid SequenceAnimalsApoptosisBase SequenceCaspasesCell DivisionCell LineCell SurvivalCysteine Proteinase InhibitorsDexamethasoneDNA PrimersEnzyme ActivationGamma RaysGene ExpressionCaspase InhibitorsCaspasesCysteine Proteinase InhibitorsDexamethasoneDNA Primersinterleukin-1beta-converting enzyme inhibitorOligopeptidesSerpinsViral Proteins

Identifiers

PMID9889190
PMCPMC1171128
OpenAlexW2000509931

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.