Evidence map›Paper›PMID 9882301›Full record

ArticleJournal of virology1999

Human papillomavirus DNA replication compartments in a transient DNA replication system.

C S Swindle, N Zou, B A Van Tine, G M Shaw, J A Engler, L T Chow

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 126 citations in OpenAlex.

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  17. DNA virus replication compartments.Journal of virology · 2014
    Review
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  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

C S SwindleDepartments of Biochemistry and Molecular Genetics, Schools of Medicine and Dentistry, University of Alabama at Birmingham, Birmingham, Alabama, USA.
N Zou
B A Van Tine
G M Shaw
J A Engler
L T Chow
Laboratory of Molecular Genetics · PLHoward Hughes Medical Institute · US

Funding

Virology CoreP30AI027767 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI OLAF KUTSCH · 1988 to 2026
$84.1M
HUMAN PAPILLOMAVIRUS GENE EXPRESSIONR01CA036200 · NCI · UNIVERSITY OF ROCHESTER · PI BROKER, THOMAS R · 1985 to 2003
$1.4M
TRAINING PROGRAM IN VIRAL ONCOLOGYT32CA009467 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HUNTER, ERIC · 1985 to 2002
$691k
INITIATION OF ADENOVIRUS-2 DNA REPLICATIONR01AI020408 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ENGLER, JEFFREY ALLEN · 1985 to 1997
–
NCI NIH HHS CA36200NCI NIH HHS R01 CA036200NCI NIH HHS T32 CA009467NCI NIH HHS T32 CA09467NIAID NIH HHS AI20408NIAID NIH HHS P30 AI027767
6 · The paper itself

Abstract

Many DNA viruses replicate their genomes at nuclear foci in infected cells. Using indirect immunofluorescence in combination with fluorescence in situ hybridization, we colocalized the human papillomavirus (HPV) replicating proteins E1 and E2 and the replicating origin-containing plasmid to nuclear foci in transiently transfected cells. The host replication protein A (RP-A) was also colocalized to these foci. These nuclear structures were identified as active sites of viral DNA synthesis by bromodeoxyuridine (BrdU) pulse-labeling. Unexpectedly, the great majority of RP-A and BrdU incorporation was found in these HPV replication domains. Furthermore, E1, E2, and RP-A were also colocalized to nuclear foci in the absence of an origin-containing plasmid. These observations suggest a spatial reorganization of the host DNA replication machinery upon HPV DNA replication or E1 and E2 expression. Alternatively, viral DNA replication might be targeted to host nuclear domains that are active during the late S phase, when such domains are limited in number. In a fraction of cells expressing E1 and E2, the promyelocytic leukemia protein, a component of nuclear domain 10 (ND10), was either partially or completely colocalized with E1 and E2. Since ND10 structures were recently hypothesized to be sites of bovine papillomavirus virion assembly, our observation suggests that HPV DNA amplification might be partially coupled to virion assembly.

Indexed as

DNA, ViralVirus ReplicationCell NucleusDNA-Binding ProteinsDNA ReplicationHumansNeoplasm ProteinsNuclear ProteinsPapillomaviridaePlasmidsPromyelocytic Leukemia ProteinReplication OriginReplication Protein ATranscription FactorsTumor Cells, CulturedTumor Suppressor ProteinsDNA-Binding ProteinsDNA, ViralE1 protein, Human papillomavirus type 11Neoplasm ProteinsNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinReplication Protein ARPA1 protein, humanTranscription FactorsTumor Suppressor ProteinsViral Proteins

Identifiers

PMID9882301
PMCPMC103920
OpenAlexW2098769511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.