Evidence map›Paper›PMID 9876165›Full record

ArticleBiophysical journal1999

Analysis of vertical fluorescence resonance energy transfer from the surface of a small-diameter sphere.

G M Jones, C Wofsy, C Aurell, L A Sklar

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

G M JonesDepartment of Pathology, The University of New Mexico, Albuquerque, New Mexico 87131, USA.
C Wofsy
C Aurell
L A Sklar
University of New Mexico · USUniversity of California, Riverside · US

Funding

WORKSHOP AT INTERNATIONAL SOCIETY FOR ANALYTICAL CYTOLOGYP41RR001315 · NCRR · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI DOORN, JONATHAN A · 1985 to 2011
$19.2M
TLR activation of Rho GTPase regulated signaling pathwayP01GM037696 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 1987 to 2006
$9.0M
NCRR NIH HHS RR01315NIGMS NIH HHS GM37696
6 · The paper itself

Abstract

Fluorescence resonance energy transfer (FRET) measurements have been used to analyze fluorophore separations in a number of varying geometries, including small particles and extended surfaces. This study focuses on the geometry created by a donor extended above the surface of a small sphere (radius < R0), where the acceptors are integrated into the sphere surface. The model of this geometry was based on an amphipathic molecule with its lipophilic region integrated into a detergent micelle and its hydrophilic region extending outward from the micelle surface, where the donor fluorophore is attached to the hydrophilic region of the molecule. Based on random acceptor incorporation into the micelle, a Poisson distribution was used to calculate the distribution of acceptor probes across the micelle population. The model converges to RET on a flat surface when the radius of the micelle exceeds 0.8 R0. The model was also used to simulate FRET data showing that the positions of donors above the micelle surface could be uniquely resolved. Experimental verification of the model was achieved in a sulfobetaine palmitate micelle with fluorescein isothiocyanate donors attached to detergent-solubilized lipopolysaccharide (LPS) and lipophilic Fast-DiI acceptors. The use of steady-state analysis allowed resolution of cases in which donors were located at different distances from the surface. Combining steady-state with excited-state lifetime analysis allowed resolution of cases where there was a combination of distances. Given the large number of biomolecules that interact with lipids, this approach may prove generally useful for defining molecular conformation.

Indexed as

Spectrometry, FluorescenceBiophysical PhenomenaBiophysicsFluorescein-5-isothiocyanateFluorescent DyesLipidsMicellesMicrospheresModels, ChemicalMolecular ConformationParticle SizeSurface PropertiesFluorescein-5-isothiocyanateFluorescent DyesLipidsMicelles

Identifiers

PMID9876165
PMCPMC1302542
OpenAlexW2012533729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.