Evidence map›Paper›PMID 9858567›Full record

ArticleMolecular and cellular biology1999

Two distinct gamma interferon-inducible promoters of the major histocompatibility complex class II transactivator gene are differentially regulated by STAT1, interferon regulatory factor 1, and transforming growth factor beta.

J F Piskurich, M W Linhoff, Y Wang, J P Ting

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 184 citations in OpenAlex.

  1. Trial
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  7. FBXO11 constitutes a major negative regulator of MHC class II through ubiquitin-dependent proteasomal degradation of CIITA.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
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  12. Biological Consequences of MHC-II Expression by Tumor Cells in Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Article
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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J F PiskurichLineberger Comprehensive Cancer Center and Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
M W Linhoff
Y Wang
J P Ting
University of North Carolina at Chapel Hill · US

Funding

Molecular and Functional Analysis of NLR Family MembersR01AI029564 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Jenny P Ting · 1991 to 2026
$6.0M
Plexin-A1: Regulation by CIITA and Immunologic FunctionR37AI029564 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TING, JENNY P · 2008 to 2017
$3.8M
Role of Class II MHC Antigens in Neurologic DiseasesR01NS034190 · NINDS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI TING, JENNY P.Y. · 1995 to 2005
$1.6M
IMMUNE MECHANISMS OF TRANSPLANT REJECTION AND TOLERANCEP01AI041580 · NIAID · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI TING, JENNY P.Y. · 1997 to 2000
$806k
MOLECULAR REGULATION OF CLASS II MHC GENESR01AI041751 · NIAID · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI TING, JENNY P.Y. · 1997 to 2001
$611k
Plexin-A1: Regulation by CIITA and immunologic functionR56AI029564 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TING, JENNY P.Y. · 2007 to 2007
$363k
NIAID NIH HHS AI029564NIAID NIH HHS AI41580NIAID NIH HHS AI41751NIAID NIH HHS P01 AI041580NIAID NIH HHS R01 AI029564NIAID NIH HHS R37 AI029564NIAID NIH HHS R56 AI029564NINDS NIH HHS R01 NS034190
6 · The paper itself

Abstract

The major histocompatibility complex (MHC) class II transactivator (CIITA) is the master regulatory factor required for appropriate expression of class II MHC genes. Understanding the expression of CIITA is key to understanding the regulation of class II MHC genes. This report describes the independent regulation of two distinct CIITA promoters by cytokines with opposing functions, gamma interferon (IFN-gamma) and transforming growth factor beta (TGF-beta). A functional analysis of deletion mutations of the upstream promoter (promoter III) identified an IFN-gamma-responsive region located approximately 5 kb from the transcriptional start site. An in vivo DNase I hypersensitivity analysis detected a hypersensitive site in this area which supports the relevance of this region. When the downstream promoter (promoter IV) was studied by in vivo genomic footprinting, IFN-gamma-induced changes at putative binding sites for STAT1, interferon regulatory factor 1 (IRF-1), and E-box proteins were seen. Gel shift and supershift analyses for IRF-1 confirmed the in vivo footprint results. The role of the IFN-gamma-inducible transcription factor STAT1 was examined functionally. Although both promoters were controlled by STAT1, promoter-specific regulation was exhibited. The IFN-gamma response of promoter III was completely dependent on STAT1 and not IRF-1, while promoter IV was partially activated by IRF-1 in the total absence of STAT1 expression. While both promoters were affected by TGF-beta, activation of promoter III by IFN-gamma was more severely diminished by TGF-beta treatment. The differential control of CIITA promoters by TGF-beta, IRF-1, and STAT1 may be important in refining regulation of class II MHC genes in different cell types and under different stimulatory conditions.

Indexed as

Genes, MHC Class IINuclear ProteinsPromoter Regions, GeneticBase SequenceBinding SitesDeoxyribonuclease IDNA-Binding ProteinsDNA FootprintingGene Expression RegulationHumansInterferon-gammaInterferon Regulatory Factor-1Molecular Sequence DataMutagenesisPhosphoproteinsSTAT1 Transcription FactorDeoxyribonuclease IDNA-Binding ProteinsInterferon-gammaInterferon Regulatory Factor-1IRF1 protein, humanMHC class II transactivator proteinNuclear ProteinsPhosphoproteinsSTAT1 protein, humanSTAT1 Transcription FactorTrans-ActivatorsTransforming Growth Factor beta

Identifiers

PMID9858567
PMCPMC83901
OpenAlexW1824777900

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.