Evidence map›Paper›PMID 9858540›Full record

ArticleMolecular and cellular biology1999

A novel intron element operates posttranscriptionally To regulate human N-myc expression.

L E Sivak, G Pont-Kingdon, K Le, G Mayr, K F Tai, B T Stevens, W L Carroll

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In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

L E SivakDepartment of Experimental Pathology, Department of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah 84112, USA.
G Pont-Kingdon
K Le
G Mayr
K F Tai
B T Stevens
W L Carroll
Center for Children · USHuntsman Cancer Institute · US

Funding

MULTIDISCPLINARY BASIC CANCER RESEARCH TRAININGT32CA009602 · NCI · UNIVERSITY OF UTAH · PI LEMONS, RICHARD S · 1988 to 1998
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NCI NIH HHS 5T32CA09602NCI NIH HHS T32 CA009602
6 · The paper itself

Abstract

Precisely regulated expression of oncogenes and tumor suppressor genes is essential for normal development, and deregulated expression can lead to cancer. The human N-myc gene normally is expressed in only a subset of fetal epithelial tissues, and its expression is extinguished in all adult tissues except transiently in pre-B lymphocytes. The N-myc gene is overexpressed due to genomic amplification in the childhood tumor neuroblastoma. In previous work to investigate mechanisms of regulation of human N-myc gene expression, we observed that N-myc promoter-chloramphemicol acelyltransferase reporter constructs containing sequences 5' to exon 1 were active in all cell types examined, regardless of whether endogenous N-myc RNA was detected. In contrast, inclusion of the first exon and a portion of the first intron allowed expression only in those cell types with detectable endogenous N-myc transcripts. We investigated further the mechanisms by which this tissue-specific control of N-myc expression is achieved. Using nuclear run-on analyses, we determined that the N-myc gene is actively transcribed in all cell types examined, indicating a posttranscriptional mode of regulation. Using a series of N-myc intron 1 deletion constructs, we localized a 116-bp element (tissue-specific element [TSE]) within the first intron that directs tissue-specific N-myc expression. The TSE can function independently to regulate expression of a heterologous promoter-reporter minigene in a cell-specific pattern that mirrors the expression pattern of the endogenous N-myc gene. Surprisingly, the TSE can function in both sense and antisense orientations to regulate gene expression. Our data indicate that the human N-myc TSE functions through a posttranscriptional mechanism to regulate N-myc expression.

Indexed as

Gene Expression Regulation, NeoplasticIntronsAdultChloramphenicol O-AcetyltransferaseExonsHL-60 CellsHumansK562 CellsNeuroblastomaPromoter Regions, GeneticProto-Oncogene Proteins c-mycRNARNA Processing, Post-TranscriptionalTranscription, GeneticU937 CellsChloramphenicol O-AcetyltransferaseProto-Oncogene Proteins c-mycRNA

Identifiers

PMID9858540
PMCPMC83874
OpenAlexW2115987795

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.