Evidence map›Paper›PMID 9858510›Full record

ArticleThe Journal of experimental medicine1998

Interleukin 7 receptor control of T cell receptor gamma gene rearrangement: role of receptor-associated chains and locus accessibility.

S K Durum, S Candèias, H Nakajima, W J Leonard, A M Baird, L J Berg, K Muegge

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 130 citations in OpenAlex.

  1. Trial
  2. Food for thought: Nutrient metabolism controlling early T cell development.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  3. T Cell Development: From T-Lineage Specification to Intrathymic Maturation.Advances in experimental medicine and biology · 2025
    Review
  4. Article
  5. Article
  6. Advances in IL-7 Research on Tumour Therapy.Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Critical requirement of GABPalpha for normal T cell development.The Journal of biological chemistry · 2010
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

S K DurumLaboratory of Molecular Immunoregulation, National Cancer Institute, Frederick, Maryland 21702, USA.
S Candèias
H Nakajima
W J Leonard
A M Baird
L J Berg
K Muegge
Science Applications International Corporation (United States) · USUniversity of Massachusetts Chan Medical School · USNational Cancer Institute · US

Funding

PHS HHS N01-C0-56000
6 · The paper itself

Abstract

VDJ recombination of T cell receptor and immunoglobulin loci occurs in immature lymphoid cells. Although the molecular mechanisms of DNA cleavage and ligation have become more clear, it is not understood what controls which target loci undergo rearrangement. In interleukin 7 receptor (IL-7R)alpha-/- murine thymocytes, it has been shown that rearrangement of the T cell receptor (TCR)-gamma locus is virtually abrogated, whereas other rearranging loci are less severely affected. By examining different strains of mice with targeted mutations, we now observe that the signaling pathway leading from IL-7Ralpha to rearrangement of the TCR-gamma locus requires the gammac receptor chain and the gammac-associated Janus kinase Jak3. Production of sterile transcripts from the TCR-gamma locus, a process that generally precedes rearrangement of a locus, was greatly repressed in IL-7Ralpha-/- thymocytes. The repressed transcription was not due to a lack in transcription factors since the three transcription factors known to regulate this locus were readily detected in IL-7Ralpha-/- thymocytes. Instead, the TCR-gamma locus was shown to be methylated in IL-7Ralpha-/- thymocytes. Treatment of IL-7Ralpha-/- precursor T cells with the specific histone deacetylase inhibitor trichostatin A released the block of TCR-gamma gene rearrangement. This data supports the model that IL-7R promotes TCR-gamma gene rearrangement by regulating accessibility of the locus via demethylation and histone acetylation of the locus.

Indexed as

AnimalsBone Marrow CellsChromatinDNADNA MethylationEnhancer Elements, GeneticEnzyme InhibitorsGene Rearrangement, gamma-Chain T-Cell Antigen ReceptorGenes, RAG-1Hematopoietic Stem CellsHistone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsJanus Kinase 3MiceMice, Inbred C57BLChromatinDNAEnzyme InhibitorsHistone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsJak3 protein, mouseJanus Kinase 3Protein-Tyrosine KinasesReceptors, Antigen, T-Cell, gamma-deltaReceptors, Interleukin-7RNATranscription Factorstrichostatin A

Identifiers

PMID9858510
PMCPMC2212428
OpenAlexW2034433166

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.