Evidence map›Paper›PMID 9848649›Full record

ArticleRNA (New York, N.Y.)1998

Cap-independent polysomal association of natural mRNAs encoding c-myc, BiP, and eIF4G conferred by internal ribosome entry sites.

G Johannes, P Sarnow

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 143 papers.

0numbers the graph read from it
0cells of the map it votes in
143citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

143 citing papers in PubMed, 259 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Circular RNA translation, a path to hidden proteome.Wiley interdisciplinary reviews. RNA · 2022
    Review
  12. Synthetic polycistronic sequences in eukaryotes.Synthetic and systems biotechnology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

83 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

G JohannesDepartment of Microbiology and Immunology, Stanford University School of Medicine, California 94305, USA.
P Sarnow
Stanford University · US

Funding

TRANSLATIONAL INITIATION IN EUKARYOTIC MRNA MOLECULESR01GM055979 · NIGMS · STANFORD UNIVERSITY · PI SARNOW, PETER · 1996 to 2005
$1.2M
ANTENNAPEDIA MRNA PROTEIN INTERACTIONSF32GM016751 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI JOHANNES, GREGG J · 1995 to 1996
–
NIGMS NIH HHS F32 GM16751NIGMS NIH HHS R01 GM55979
6 · The paper itself

Abstract

Sequence elements that can function as internal ribosome entry sites (IRES) have been identified in 5' noncoding regions of certain uncapped viral and capped cellular mRNA molecules. However, it has remained largely unknown whether IRES elements are functional when located in their natural capped mRNAs. Therefore, the polysomal association and translation of several IRES-containing cellular mRNAs was tested under conditions that severely inhibited cap-dependent translation, that is, after infection with poliovirus. It was found that several known IRES-containing mRNAs, such as BiP and c-myc, were both associated with the translation apparatus and translated in infected cells when cap-dependent translation of most host-cell mRNAs was blocked, indicating that the IRES elements were functional in their natural mRNAs. Curiously, the mRNAs that encode eukaryotic initiation factor 4GI (eIF4GI) and 4GII (eIF4GII), two proteins with high identity and similar functions in the initiation of cap-dependent translation, were both associated with polysomes in infected cells. The 5'-end sequences of eIF4GI mRNA were isolated from a cDNA expression library and shown to function as an internal ribosome entry site when placed into a dicistronic mRNA. These findings suggest that eIF4G proteins can be synthesized at times when 5' cap-dependent mRNA translation is blocked, supporting the notion that eIF4G proteins are needed in both 5' cap-independent and 5' cap-dependent translational initiation mechanisms.

Indexed as

Heat-Shock ProteinsRNA CapsAmino Acid SequenceBase SequenceCarrier ProteinsDNA, ComplementaryEndoplasmic Reticulum Chaperone BiPEukaryotic Initiation Factor-4GHeLa CellsHumansHydrolysisMolecular ChaperonesMolecular Sequence DataPeptide Initiation FactorsPoliomyelitisProtein BiosynthesisCarrier ProteinsDNA, ComplementaryEndoplasmic Reticulum Chaperone BiPEukaryotic Initiation Factor-4GHeat-Shock ProteinsMolecular ChaperonesPeptide Initiation FactorsProto-Oncogene Proteins c-mycRNA CapsRNA, Messenger

Identifiers

PMID9848649
PMCPMC1369721
OpenAlexW2142374550

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.