Evidence map›Paper›PMID 9847080›Full record

ArticleGenome research1998

Construction of an approximately 700-kb transcript map around the familial Mediterranean fever locus on human chromosome 16p13.3.

M Centola, X Chen, R Sood, Z Deng, I Aksentijevich, T Blake, D O Ricke, X Chen, G Wood, N Zaks and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Introduction of Francis S. Collins.The Journal of clinical investigation · 2015
    Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 6 institutions in 2 countries.

M CentolaArthritis and Rheumatism Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health (NIH), Bethesda, Maryland 20892-1820, USA.
X Chen
R Sood
Z Deng
I Aksentijevich
T Blake
D O Ricke
X Chen
G Wood
N Zaks
N Richards
D Krizman
E Mansfield
S Apostolou
J Liu
N Shafran
A Vedula
M Hamon
A Cercek
T Kahan
D Gumucio
D F Callen
R I Richards
R K Moyzis
N A Doggett
F S Collins
P P Liu
N Fischel-Ghodsian
D L Kastner
National Institutes of Health · USCedars-Sinai Medical Center · USLos Alamos National Laboratory · USWomen's and Children's Hospital · AUNational Institute of Arthritis and Musculoskeletal and Skin Diseases · USUniversity of Michigan · US

Funding

NIAMS NIH HHS NIH-P60-AR20527
6 · The paper itself

Abstract

We used a combination of cDNA selection, exon amplification, and computational prediction from genomic sequence to isolate transcribed sequences from genomic DNA surrounding the familial Mediterranean fever (FMF) locus. Eighty-seven kb of genomic DNA around D16S3370, a marker showing a high degree of linkage disequilibrium with FMF, was sequenced to completion, and the sequence annotated. A transcript map reflecting the minimal number of genes encoded within the approximately 700 kb of genomic DNA surrounding the FMF locus was assembled. This map consists of 27 genes with discreet messages detectable on Northerns, in addition to three olfactory-receptor genes, a cluster of 18 tRNA genes, and two putative transcriptional units that have typical intron-exon splice junctions yet do not detect messages on Northerns. Four of the transcripts are identical to genes described previously, seven have been independently identified by the French FMF Consortium, and the others are novel. Six related zinc-finger genes, a cluster of tRNAs, and three olfactory receptors account for the majority of transcribed sequences isolated from a 315-kb FMF central region (between D16S468/D16S3070 and cosmid 377A12). Interspersed among them are several genes that may be important in inflammation. This transcript map not only has permitted the identification of the FMF gene (MEFV), but also has provided us an opportunity to probe the structural and functional features of this region of chromosome 16.

Indexed as

Amino Acid SequenceChromosomes, Human, Pair 16Cloning, MolecularDNADNA, ComplementaryExonsFamilial Mediterranean FeverGene AmplificationGenesGenome, HumanHumansMolecular Sequence DataMultigene FamilyPhysical Chromosome MappingReceptors, OdorantRNA, TransferDNADNA, ComplementaryReceptors, OdorantRNA, Transfer

Identifiers

PMID9847080
PMCPMC310791
OpenAlexW2133616065

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.