ArticleGenetics1998
Physical mapping of duplicated genomic regions of two chromosome ends in rice.
Article in Genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
27 citing papers in PubMed.
- Evolution and Molecular Control of Hybrid Incompatibility in Plants.Frontiers in plant science · 2016Review
- Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat.Molecular genetics and genomics : MGG · 2014Article
- Chromosomal Location of HCA1 and HCA2, Hybrid Chlorosis Genes in Rice.International journal of plant genomics · 2012Article
- A major locus qS12, located in a duplicated segment of chromosome 12, causes spikelet sterility in an indica-japonica rice hybrid.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.Proceedings of the National Academy of Sciences of the United States of America · 2010Article
- Genome-wide analysis of genes encoding FK506-binding proteins in rice.Plant molecular biology · 2010Article
- A recent duplication revisited: phylogenetic analysis reveals an ancestral duplication highly-conserved throughout the Oryza genus and beyond.BMC plant biology · 2009Article
- Article
- Physical mapping, expression analysis and polymorphism survey of resistance gene analogues on chromosome 11 of rice.Journal of biosciences · 2009Article
- Filament formation and robust strand exchange activities of the rice DMC1A and DMC1B proteins.Nucleic acids research · 2008Article
- Rice pseudomolecule-anchored cross-species DNA sequence alignments indicate regional genomic variation in expressed sequence conservation.BMC genomics · 2007Article
- Large-scale, lineage-specific expansion of a bric-a-brac/tramtrack/broad complex ubiquitin-ligase gene family in rice.The Plant cell · 2007Article
- An integrated map of Oryza sativa L. chromosome 5.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.BMC biology · 2005Article
- Where does the accurate rice genome sequence lead us?Plant molecular biology · 2005Article
- A 2500-locus bin map of wheat homoeologous group 5 provides insights on gene distribution and colinearity with rice.Genetics · 2004Article
- A chromosome bin map of 2148 expressed sequence tag loci of wheat homoeologous group 7.Genetics · 2004Article
- EST derived SSR markers for comparative mapping in wheat and rice.Molecular genetics and genomics : MGG · 2004Article
- Building genomic profiles for uncovering segmental homology in the twilight zone.Genome research · 2004Article
- Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat.Functional & integrative genomics · 2004Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Two genomic regions duplicated in distal ends of the short arms of chromosomes 11 and 12 in rice (Oryza sativa L.) were characterized by YAC ordering with 46 genetic markers. Physical maps covering most of the duplicated regions were generated. Thirty-five markers, including 21 rice cDNA clones, showed the duplicated loci arrayed strictly in the same order along the two specific genomic regions. Regardless of their different genetic distances, the two duplicated segments may have a similar and minimum physical size with an expected length of about 2.5 Mb. However, differences of RFLP frequency for the duplicated DNA copies and recombination frequency for a given homoeologous area between the two regions were observed, indicating that these changes in genome organization occurred after the duplication. Our results establish a good model system for resolving the relationships between gene duplication, expression of duplicated genes, and the frequency of meiotic recombination in small chromosomal regions.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.