Evidence map›Paper›PMID 9826695›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1998

Autoregulation at the level of mRNA 3' end formation of the suppressor of forked gene of Drosophila melanogaster is conserved in Drosophila virilis.

A Audibert, M Simonelig

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

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  8. Alternative polyadenylation of mRNA precursors.Nature reviews. Molecular cell biology · 2017
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  19. Article
  20. In silico detection of control signals: mRNA 3'-end-processing sequences in diverse species.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

A AudibertDynamique du Génome et Evolution, Institut Jacques Monod, Université Denis Diderot, 2, place Jussieu, 75005 Paris, France.
M Simonelig
Institut Jacques Monod · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Drosophila melanogaster Suppressor of forked [Su(f)] protein shares homology with the yeast RNA14 protein and the 77-kDa subunit of human cleavage stimulation factor, which are proteins involved in mRNA 3' end formation. This suggests a role for Su(f) in mRNA 3' end formation in Drosophila. The su(f) gene produces three transcripts; two of them are polyadenylated at the end of the transcription unit, and one is a truncated transcript, polyadenylated in intron 4. Using temperature-sensitive su(f) mutants, we show that accumulation of the truncated transcript requires wild-type Su(f) protein. This suggests that the Su(f) protein autoregulates negatively its accumulation by stimulating 3' end formation of the truncated su(f) RNA. Cloning of su(f) from Drosophila virilis and analysis of its RNA profile suggest that su(f) autoregulation is conserved in this species. Sequence comparison between su(f) from both species allows us to point out three conserved regions in intron 4 downstream of the truncated RNA poly(A) site. These conserved regions include the GU-rich downstream sequence involved in poly(A) site definition. Using transgenes truncated within intron 4, we show that sequence up to the conserved GU-rich domain is sufficient for production of the truncated RNA and for regulation of this production by su(f). Our results indicate a role of su(f) in the regulation of poly(A) site utilization and an important role of the GU-rich sequence for this regulation to occur.

Indexed as

Drosophila ProteinsGene Expression RegulationNuclear ProteinsSaccharomyces cerevisiae ProteinsTranscription, GeneticAmino Acid SequenceAnimalsAnimals, Genetically ModifiedBase SequenceConserved SequenceDrosophilaDrosophila melanogasterExonsFungal ProteinsHomeostasisHumansDrosophila ProteinsFungal ProteinsInsect ProteinsMacromolecular SubstancesmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsRNA14 protein, S cerevisiaeRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiae Proteinssu(f) protein, Drosophila

Identifiers

PMID9826695
PMCPMC24368
OpenAlexW2038299113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.