Evidence map›Paper›PMID 9819419›Full record

ArticleMolecular and cellular biology1998

Isolation and functional characterization of cDNA of serum amyloid A-activating factor that binds to the serum amyloid A promoter.

A Ray, B K Ray

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 51 citations in OpenAlex.

  1. The Myc-associated zinc finger protein (MAZ) works together with CTCF to control cohesin positioning and genome organization.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  2. Article
  3. Article
  4. The cytokine-serum amyloid A-chemokine network.Cytokine & growth factor reviews · 2016
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Airway epithelial regulation of allergic sensitization in asthma.Pulmonary pharmacology & therapeutics · 2012
    Review
  10. Z-DNA-forming silencer in the first exon regulates human ADAM-12 gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

A RayDepartment of Veterinary Pathobiology, University of Missouri, Columbia, Missouri 65211, USA.
B K Ray
University of Missouri · US

Funding

MECHANISM OF SERUM AMYLOID A PROTEIN SYNTHESISR01DK049205 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI RAY, BIMAL K · 1996 to 2003
$858k
Mechanism of serum amyloid A protein synthesisR56DK049205 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI RAY, BIMAL K · 2005 to 2005
$67k
NIDDK NIH HHS DK49205NIDDK NIH HHS R01 DK049205NIDDK NIH HHS R56 DK049205
6 · The paper itself

Abstract

Serum amyloid A (SAA), a plasma protein inducible in response to many inflammatory conditions, is associated with the pathogenesis of several diseases including reactive amyloidosis, rheumatoid arthritis, and atherosclerosis. We have previously reported an element of the SAA promoter, designated SAA-activating sequence (SAS), that is involved in the inflammation-induced SAA expression, and a nuclear factor, SAS-binding factor (SAF), that interacts with the SAS element has been identified previously (A. Ray and B. K. Ray, Mol. Cell. Biol. 16:1584-1594, 1996). To evaluate how SAF is involved in SAA promoter activation, we have investigated structural features and functional characteristics of this transcription factor. Our studies indicate that SAF belongs to a family of transcription factors characterized by the presence of multiple zinc finger motifs of the Cys2-His2 type at the carboxyl end. Of the three cloned SAF cDNAs (SAF-1, SAF-5, and SAF-8), SAF-1 isoform showed a high degree of homology to MAZ/ZF87/Pur-1 protein while SAF-5 and SAF-8 isoforms are unique and are related to SAF-1/MAZ/ZF87/Pur-1 at the zinc finger domains but different elsewhere. Although structurally distinct, all members are capable of activating SAS element-mediated expression and display virtually identical sequence specificities. However, varying levels of expression of members of this gene family were observed in different tissues. Functional activity of SAF is regulated by a posttranslational event as SAF DNA-binding and transactivation abilities are increased by a protein phosphatase inhibitor, okadaic acid, and inhibited by a protein kinase inhibitor, H7. Consistent with this observation, increased DNA binding of the cloned SAF and its hyperphosphorylation, in response to okadaic acid treatment of the transfected cells, were observed. Taken together, our results suggest that, in addition to tissue-specific expression, SAFs, a family of zinc finger transcription factors, undergo a modification by a posttranslational event that confers their SAA promoter-binding activity and transactivation potential.

Indexed as

Amino Acid SequenceBase SequenceCell LineCloning, MolecularDNA-Binding ProteinsMolecular Sequence DataNuclear ProteinsPhosphorylationPromoter Regions, GeneticRNA, MessengerSequence AlignmentSequence Analysis, DNASequence Homology, Amino AcidSerum Amyloid A ProteinTranscriptional ActivationTranscription Factorsc-MYC-associated zinc finger proteinDNA-Binding ProteinsNuclear ProteinsRNA, MessengerSerum Amyloid A ProteinTranscription Factors

Identifiers

PMID9819419
PMCPMC109314
OpenAlexW2101882577

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.