Evidence map›Paper›PMID 9788964›Full record

ArticleThe Journal of clinical investigation1998

Chronic lymphocytic leukemia B cells express restricted sets of mutated and unmutated antigen receptors.

F Fais, F Ghiotto, S Hashimoto, B Sellars, A Valetto, S L Allen, P Schulman, V P Vinciguerra, K Rai, L Z Rassenti and 5 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01723839 (Phase II Clinical Protocol for the Treatment of Patients With Previously Untreated CLL With Four or Six Cycles of Fludarabine and Cyclophosphamide With Rituximab), which is not on this map. Cited by 293 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
293citing papers in PubMed, 1 pooled it
23.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01723839 phase2completednot on this mapstarted 2012, after this paper: background citation

Phase II Clinical Protocol for the Treatment of Patients With Previously Untreated CLL With Four or Six Cycles of Fludarabine and Cyclophosphamide With Rituximab (FCR) Plus Lenalidomide Followed by Lenalidomide Consolidation/ Maintenance

TypeinterventionalSponsorHackensack Meridian HealthRan2012 to 2021Enrolled21ConditionsChronic Lymphocytic Leukemia (CLL)ArmsFludarabine, Cyclophosphamide, Rituximab, Lenalidomide
3 · Its place in the literature

Who cites it

293 citing papers in PubMed, 1 synthesis or guideline pooled it, 872 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Single-agent lenalidomide in the treatment of previously untreated chronic lymphocytic leukemia.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2011
    Trial
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Expression Cloning of Antibodies from Single Human B Cells.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  14. Article
  15. Article
  16. Review
  17. Stereotyped B-Cell Receptor Immunoglobulins in B-Cell Lymphomas.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  18. Article
  19. Article
  20. Review

233 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 3 countries.

F FaisDepartment of Medicine, North Shore University Hospital and New York University School of Medicine, Manhasset, New York 11030, USA.
F Ghiotto
S Hashimoto
B Sellars
A Valetto
S L Allen
P Schulman
V P Vinciguerra
K Rai
L Z Rassenti
T J Kipps
G Dighiero
H W Schroeder
M Ferrarini
N Chiorazzi
Northwell Health · USNew York University · USInstitut Pasteur · FRAlleanza Contro il Cancro · ITNorth Shore University Hospital · USUniversity of Alabama at Birmingham · USUniversity of California, San Diego · US

Funding

SEROLOGIC, CELLULAR/MOLECULAR STUDIES OF AUTOANTIBODIESR01AI010811 · NIAID · ROCKEFELLER UNIVERSITY · PI CHIORAZZI, NICHOLAS · 1985 to 2000
$311k
DEVELOPMENT OF THE HUMAN ANTIBODY REPERTOIRER01AI033621 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SCHROEDER, HARRY WILLIAM · 1994 to 1997
–
DEVELOPMENT OF THE ANTIBODY REPERTOIRER21AI033621 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SCHROEDER, HARRY WILLIAM · 1998 to 1998
–
NIAID NIH HHS AI 10811NIAID NIH HHS AI 33621
6 · The paper itself

Abstract

To better understand the stage(s) of differentiation reached by B-type chronic lymphocytic leukemia (B-CLL) cells and to gain insight into the potential role of antigenic stimulation in the development and diversification of these cells, we analyzed the rearranged VH genes expressed by 83 B-CLL cells (64 IgM+ and 19 non-IgM+). Our results confirm and extend the observations of a bias in the use of certain VH, D, and JH genes among B-CLL cells. In addition, they indicate that the VH genes of approximately 50% of the IgM+ B-CLL cells and approximately 75% of the non-IgM+ B-CLL cells can exhibit somatic mutations. The presence of mutation varies according to the VH family expressed by the B-CLL cell (VH3 expressers displaying more mutation than VH1 and VH4 expressers). In addition, the extent of mutation can be sizeable with approximately 32% of the IgM+ cases and approximately 68% of the non-IgM+ cases differing by > 5% from the most similar germline gene. Approximately 20% of the mutated VH genes display replacement mutations in a pattern consistent with antigen selection. However, CDR3 characteristics (D and JH gene use and association and HCDR3 length, composition, and charge) suggest that selection for distinct B cell receptors (BCR) occurs in many more B-CLL cells. Based on these data, we suggest three prototypic BCR, representing the VH genes most frequently encountered in our study. These data suggest that many B-CLL cells have been previously stimulated, placing them in the "experienced" or "memory" CD5(+) B cell subset.

Indexed as

Gene Rearrangement, B-Lymphocyte, Heavy ChainMutationAmino Acid SequenceBinding SitesB-LymphocytesB-Lymphocyte SubsetsCD5 AntigensDNA, ComplementaryHumansImmunoglobulin MLeukemia, Lymphocytic, Chronic, B-CellMolecular Sequence DataReading FramesReceptors, Antigen, B-CellSequence Analysis, DNACD5 AntigensDNA, ComplementaryImmunoglobulin MReceptors, Antigen, B-Cell

Identifiers

PMID9788964
PMCPMC509001
OpenAlexW2111609050

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.