Evidence map›Paper›PMID 9786967›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience1998

Defining affinity with the GABAA receptor.

M V Jones, Y Sahara, J A Dzubay, G L Westbrook

Abstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

  1. Molecular assemblies and pharmacology of cerebellar GABAProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. State-dependent energetics of GABABiophysical journal · 2024
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. GABAFrontiers in cellular neuroscience · 2020
    Article
  11. Article
  12. Amino acid substitutions in the human homomeric βThe Journal of biological chemistry · 2019
    Article
  13. Analysis of GABAMolecular pharmacology · 2019
    Article
  14. Article
  15. Deactivation kinetics of acid-sensing ion channel 1a are strongly pH-sensitive.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  16. Article
  17. Article
  18. Article
  19. Synaptic GABAA receptor clustering without the γ2 subunit.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

M V JonesVollum Institute, Oregon Health Sciences University, Portland, Oregon 97201, USA.
Y Sahara
J A Dzubay
G L Westbrook

Funding

SYNAPTIC TRANSMISSION IN THE CNSR01NS026494 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI WESTBROOK, GARY L · 1993 to 2009
$3.0M
NON-EQUILIBRIUM KINETICS OF GABA-A CHANNELS IN THE CNSF32NS009716 · NINDS · OREGON HEALTH AND SCIENCE UNIVERSITY · PI JONES, MATHEW V · 1994 to 1995
–
EXCITATORY SYNAPTIC MECHANISMS IN THE CNSR29NS026494 · NINDS · OREGON HEALTH AND SCIENCE UNIVERSITY · PI WESTBROOK, GARY L · 1988 to 1992
–
NINDS NIH HHS F32 NS009716NINDS NIH HHS F32 NS09716NINDS NIH HHS NS26494NINDS NIH HHS R01 NS026494
6 · The paper itself

Abstract

At nicotinic and glutamatergic synapses, the duration of the postsynaptic response depends on the affinity of the receptor for transmitter (Colquhoun et al., 1977;Pan et al., 1993). Affinity is often thought to be determined by the ligand unbinding rate, whereas the binding rate is assumed to be diffusion-limited. In this view, the receptor selects for those ligands that form a stable complex on binding, but binding is uniformly fast and does not itself affect selectivity. We tested these assumptions for the GABAA receptor by dissecting the contributions of microscopic binding and unbinding kinetics for agonists of equal efficacy but of widely differing affinities. Agonist pulses applied to outside-out patches of cultured rat hippocampal neurons revealed that agonist unbinding rates could not account for affinity if diffusion-limited binding was assumed. However, direct measurement of the instantaneous competition between agonists and a competitive antagonist revealed that binding rates were orders of magnitude slower than expected for free diffusion, being more steeply correlated with affinity than were the unbinding rates. The deviation from diffusion-limited binding indicates that a ligand-specific energy barrier between the unbound and bound states determines GABAA receptor selectivity. This barrier and our kinetic observations can be quantitatively modeled by requiring the participation of movable elements within a flexible GABA binding site.

Indexed as

AnimalsAnimals, Newbornbeta-AlanineCells, CulturedGABA AgonistsGABA AntagonistsGABA-A Receptor Agonistsgamma-Aminobutyric AcidHippocampusIsoxazolesLigandsMuscimolNeuronsPatch-Clamp TechniquesPyridazinesRatsbeta-AlanineGABA AgonistsGABA AntagonistsGABA-A Receptor Agonistsgabazinegaboxadolgamma-Aminobutyric AcidIsoxazolesLigandsMuscimolPyridazinesReceptors, GABA-A

Identifiers

PMID9786967
PMCPMC6793556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.