Evidence map›Paper›PMID 9783702›Full record

ArticleJournal of medical genetics1998

The prevalence of PAX2 mutations in patients with isolated colobomas or colobomas associated with urogenital anomalies.

H E Cunliffe, L A McNoe, T A Ward, K Devriendt, H G Brunner, M R Eccles

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 73 citations in OpenAlex.

  1. A Single Cell Atlas of the Newt Iris During Lens Regeneration.bioRxiv : the preprint server for biology · 2025
    Article
  2. The Role of PAX2 in Neurodevelopment and Disease.Neuropsychiatric disease and treatment · 2021
    Review
  3. Review
  4. Diverse phenotypes in children with PAX2-related disorder.Molecular genetics & genomic medicine · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Renal coloboma syndrome.European journal of human genetics : EJHG · 2011
    Review
  10. Clinical utility gene card for: renal coloboma (Papillorenal) syndrome.European journal of human genetics : EJHG · 2011
    Article
  11. Article
  12. Article
  13. Article
  14. A clinico-genetic study of renal coloboma syndrome in children.Pediatric nephrology (Berlin, Germany) · 2007
    Article
  15. Article
  16. Article
  17. PAX2 suppresses apoptosis in renal collecting duct cells.The American journal of pathology · 2000
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

H E CunliffeDepartment of Biochemistry, University of Otago, Dunedin, New Zealand.
L A McNoe
T A Ward
K Devriendt
H G Brunner
M R Eccles
University of Otago · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The PAX2 gene is mutated in patients with ocular colobomas, vesicoureteral reflux (VUR), and kidney anomalies (renal-coloboma syndrome, OMIM 120330). The three abnormalities which make up this syndrome also occur in isolation, but the causal genes are not known. PAX2 encodes a transcription factor of the paired box class of DNA binding proteins, important for the development of the urogenital tract, optic nerve and adjacent retina, inner ear, and CNS. In this paper we have investigated the prevalence of PAX2 mutations in patients with ocular colobomas, microphthalmos, or retinal anomalies, either in isolation or with associated urogenital anomalies. Using PCR-SSCP, most or all exons of PAX2 were examined in blood DNA from 99 patients who have either ocular anomalies alone or a combination of ocular and urogenital conditions. PAX2 mutations were not detected in patients with ocular colobomas, either in isolation or with associated abnormalities, except in one patient with typical renal-coloboma syndrome. We conclude that PAX2 mutations are unlikely to be common in patients with ocular colobomas in isolation or in patients with ocular colobomas and associated anomalies, except for patients with typical renal-coloboma syndrome where PAX2 is known to be the aetiological cause.

Indexed as

Abnormalities, MultipleAdolescentAdultChildChild, PreschoolColobomaDNADNA-Binding ProteinsDNA Mutational AnalysisExonsFemaleHeterozygoteHumansKaryotypingMaleMiddle AgedDNADNA-Binding ProteinsPAX2 protein, humanPAX2 Transcription FactorTranscription Factors

Identifiers

PMID9783702
PMCPMC1051454
OpenAlexW2101054094

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.