Evidence map›Paper›PMID 9742454›Full record

ArticleJournal of muscle research and cell motility1998

Amino-acid sequence of squid myosin heavy chain.

K Matulef, K Sirokmán, C L Perreault-Micale, A G Szent-Györgyi

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of muscle research and cell motility, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Tuning of shortening speed in coleoid cephalopod muscle: no evidence for tissue-specific muscle myosin heavy chain isoforms.Invertebrate biology : a quarterly journal of the American Microscopical Society and the Division of Invertebrate Zoology/ASZ · 2016
    Article
  2. The Musculature of Coleoid Cephalopod Arms and Tentacles.Frontiers in cell and developmental biology · 2016
    Review
  3. Article
  4. Purification, crystallization and preliminary X-ray crystallographic analysis of squid heavy meromyosin.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
  5. Article
  6. Article
  7. Microsequencing of myosins for PCR primer design.Methods in molecular biology (Clifton, N.J.) · 2001
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K MatulefDepartment of Biology, Brandeis University, Waltham, Massachusetts 02254-9110, USA.
K Sirokmán
C L Perreault-Micale
A G Szent-Györgyi
Brandeis University · US

Funding

REGULATION IN STRIATED, SMOOTH, AND CARDIAC MUSCLESR01AR015963 · NIAMS · BRANDEIS UNIVERSITY · PI SZENT-GYORGYI, ANDREW G · 1986 to 1986
–
BASIS FOR HETEROGENEITY OF SS-A/RO AUTOANTIGENSR29AR041803 · NIAMS · SCRIPPS RESEARCH INSTITUTE · PI CHAN, EDWARD K · 1992 to 1996
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REGULATION IN STRIATED SMOOTH &CARDIAC MUSCLESR37AR015963 · NIAMS · BRANDEIS UNIVERSITY · PI SZENT-GYORGYI, ANDREW G · 1987 to 1996
–
NIAMS NIH HHS AR15963NIAMS NIH HHS AR41803
6 · The paper itself

Abstract

This work describes the determination of the cDNA sequence encoding the myosin heavy chain (MHC) of the squid, Loligo pealei. To date, the amino-acid sequence of the MHC of calcium-regulated myosins is known only for two closely related species of scallops. We have determined the sequence of the entire coding region of the muscle MHC of squid, a cephalopod, and compared it with the MHC of scallops, which are pelecypods, and to other regulated and non-regulated myosins. Residues present in the MHC of only regulated myosins have been identified. The 6504 base pair (bp) sequence contains an open reading frame of 5805 nucleotides, which encodes 1935 amino acids. The sequence includes 697 bps of 3' untranslated sequence and 2 bps of 5' untranslated sequence. The deduced amino-acid sequence shows the squid MHC to be 72-73% identical and 86-87% similar to the calcium-regulated scallop MHCs cloned previously. In contrast, the squid MHC sequence is only 54-55% identical and 74% similar to skeletal MHCs of non-regulated myosins such as human fast skeletal embryonic and human perinatal skeletal muscle, and 39-40% identical and 60-62% similar to smooth muscle MHC of rabbit uterus muscle and chicken gizzard muscle, respectively. We have also detected two isoforms of the MHC in squid that appear to be spliced variants of a single myosin gene. These isoforms differ in the sequence encoding the surface loop at the nucleotide binding site. Taken together, our data may help to identify more precisely the residues that are crucial in regulated myosins.

Indexed as

Amino Acid SequenceAmino AcidsAnimalsBase SequenceBinding SitesCloning, MolecularDecapodiformesHumansMolecular Sequence DataMyosin Heavy ChainsProtein IsoformsProtein Structure, TertiarySequence Homology, Amino AcidShellfishStructure-Activity RelationshipAmino AcidsMyosin Heavy ChainsProtein Isoforms

Identifiers

PMID9742454
OpenAlexW2182764544

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.