Evidence map›Paper›PMID 9742131›Full record

ArticleMolecular and cellular biology1998

Circadian regulation of a Drosophila homolog of the mammalian Clock gene: PER and TIM function as positive regulators.

K Bae, C Lee, D Sidote, K Y Chuang, I Edery

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 222 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Alternative splicing ofProceedings of the National Academy of Sciences of the United States of America · 2024
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  7. Alternative splicing ofbioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. The Circadian Clock in Lepidoptera.Frontiers in physiology · 2021
    Review
  14. Article
  15. Article
  16. Model and Non-model Insects in Chronobiology.Frontiers in behavioral neuroscience · 2020
    Review
  17. Article
  18. Review
  19. Review
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

K BaeGraduate Program in Microbiology and Molecular Genetics, Center for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, New Jersey 08854, USA.
C Lee
D Sidote
K Y Chuang
I Edery
Rutgers, The State University of New Jersey · US

Funding

CLOCK MECHANISM UNDERLYING RHYTHMIC BEHAVIORR01NS034958 · NINDS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI EDERY, ISAAC · 1995 to 2016
$5.5M
NINDS NIH HHS R01 NS034958
6 · The paper itself

Abstract

The Clock gene plays an essential role in the manifestation of circadian rhythms (approximately 24 h) in mice and is a member of the basic helix-loop-helix (bHLH) PER-ARNT-SIM (PAS) superfamily of transcription factors. Here we report the characterization of a novel Drosophila bHLH-PAS protein that is highly homologous to mammalian CLOCK. (Similar findings were recently described by Allada et al. Cell 93:791-804, 1998, and Darlington et al., Science 280:1599-1603, 1998.) Transcripts from this putative Clock ortholog (designated dClock) undergo daily rhythms in abundance that are antiphase to the cycling observed for the RNA products from the Drosophila melanogaster circadian clock genes period (per) and timeless (tim). Furthermore, dClock RNA cycling is abolished and the levels are at trough values in the absence of either PER or TIM, suggesting that these two proteins can function as transcriptional activators, a possibility which is in stark contrast to their previously characterized role in transcriptional autoinhibition. Finally, the temporal regulation of dClock expression is quickly perturbed by shifts in light-dark cycles, indicating that this molecular rhythm is closely connected to the photic entrainment pathway. The isolation of a Drosophila homolog of Clock together with the recent discovery of mammalian homologs of per indicate that there is high structural conservation in the integral components underlying circadian oscillators in Drosophila and mammals. Nevertheless, because mammalian Clock mRNA is constitutively expressed, our findings are a further example of striking differences in the regulation of putative circadian clock orthologs in different species.

Indexed as

Circadian RhythmDrosophila ProteinsHelix-Loop-Helix MotifsAmino Acid SequenceAnimalsBase SequenceBasic Helix-Loop-Helix ProteinsCLOCK ProteinsDarknessDNA, ComplementaryDrosophila melanogasterEndothelial PAS Domain-Containing Protein 1Insect ProteinsLightMammalsMolecular Sequence DataBasic Helix-Loop-Helix ProteinsClock protein, mouseCLOCK ProteinsDNA, ComplementaryDrosophila ProteinsEndothelial PAS Domain-Containing Protein 1Insect ProteinsNuclear ProteinsPeriod Circadian ProteinsPER protein, DrosophilaRNAtim protein, DrosophilaTrans-Activators

Identifiers

PMID9742131
PMCPMC109200
OpenAlexW2164615969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.