Evidence map›Paper›PMID 9736730›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1998

Genetic code origins: tRNAs older than their synthetases?

L Ribas de Pouplana, R J Turner, B A Steer, P Schimmel

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Does the genetic code have a eukaryotic origin?Genomics, proteomics & bioinformatics · 2013
    Article
  11. The RNA origin of transfer RNA aminoacylation and beyond.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2011
    Article
  12. Article
  13. A mechanism for functional segregation of mitochondrial and cytosolic genetic codes.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  14. Article
  15. Emergence of the universal genetic code imprinted in an RNA record.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  16. Nonorthologous replacement of lysyl-tRNA synthetase prevents addition of lysine analogues to the genetic code.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

L Ribas de PouplanaThe Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
R J Turner
B A Steer
P Schimmel

Funding

GENETIC APPROACHES TO PROTEIN/NUCLEIC ACID INTERACTIONSR01GM023562 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SCHIMMEL, PAUL R · 1985 to 2012
$4.9M
NIGMS NIH HHS GM23562NIGMS NIH HHS R01 GM023562
6 · The paper itself

Abstract

We present a phylogenetic analysis to determine whether a given tRNA molecule was established in evolution before its cognate aminoacyl-tRNA synthetase. The earlier appearance of tRNA versus their metabolically related enzymes is a prediction of the RNA world theory, but the available synthetase and tRNA sequences previously had not allowed a formal comparison of their relative time of appearance. Using data recently obtained from the emerging genome projects, our analysis points to the extant forms of lysyl-tRNA synthetase being preceded in evolution by the establishment of the identity of lysine tRNA.

Indexed as

Amino Acyl-tRNA SynthetasesArchaeaBacteriaBiological EvolutionEukaryotic CellsGenetic CodePhylogenyRNARNA, TransferRNA, Transfer, LysSequence AlignmentAmino Acyl-tRNA SynthetasesRNARNA, TransferRNA, Transfer, Lys

Identifiers

PMID9736730
PMCPMC21636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.