Evidence map›Paper›PMID 9725836›Full record

ArticleGenetics1998

Molecular evolution of the Cecropin multigene family in Drosophila. functional genes vs. pseudogenes.

S Ramos-Onsins, M Aguadé

Abstract read
In one paragraph

Article in Genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
  5. Review
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  8. Article
  9. Article
  10. The potential for adaptive maintenance of diversity in insect antimicrobial peptides.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2016
    Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Gene duplication and the genome distribution of sex-biased genes.International journal of evolutionary biology · 2011
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

S Ramos-OnsinsDepartament de Genètica, Facultat de Biologia, Universitat de Barcelona, 08071 Barcelona, Spain.
M Aguadé

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Approximately 4 kb of the Cecropin cluster region have been sequenced in nine lines of Drosophila melanogaster and one line of the sibling species D. simulans, D. mauritiana, and D. sechellia. This region includes three functional genes (CecA1, CecA2, and CecB), which are involved in the insect immune response, and two pseudogenes (CecPsi1 and CecPsi2). The level of silent polymorphism in the three Cec genes is rather high (0.028), and there is no excess of nonsynonymous polymorphism. There is no evidence of gene conversion in the history of these genes. The interspecific comparison has revealed that in the three species of the simulans cluster the CecA2 gene is partially deleted and has therefore lost its function and become a pseudogene; in each of the species, subsequent deletions have accumulated. Divergence estimates indicate that the CecPsi1 and CecPsi2 pseudogenes are highly diverged, both between themselves and relative to the other three Cec genes. However, both CecPsi1 and CecPsi2 have conserved transcriptional signals and splice sites, and they present an open reading frame; also, correctly spliced transcripts have been detected for both CecPsi1 and CecPsi2. The data support that these genes are either active genes with some null alleles or young pseudogenes.

Indexed as

Evolution, MolecularMultigene FamilyPseudogenesAmino Acid SequenceAnimalsBase SequenceDNADrosophilaInsect ProteinsMolecular Sequence DataPolymorphism, GeneticSequence Homology, Amino AcidSequence Homology, Nucleic AcidSpecies SpecificityDNAInsect Proteins

Identifiers

PMID9725836
PMCPMC1460299

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.