Evidence map›Paper›PMID 9712644›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience1998

Transcriptional regulation of the GluR2 gene: neural-specific expression, multiple promoters, and regulatory elements.

S J Myers, J Peters, Y Huang, M B Comer, F Barthel, R Dingledine

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 132 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The Importance of REST for Development and Function of Beta Cells.Frontiers in cell and developmental biology · 2017
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Epigenetic mechanisms in stroke and epilepsy.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2013
    Review
  13. Article
  14. Epigenetics and epilepsy.Epilepsia · 2012
    Review
  15. Article
  16. GluA2 AMPA glutamate receptor subunit exhibits codon 607 Q/R RNA editing in the lens.Biochemical and biophysical research communications · 2012
    Article
  17. The Rett syndrome protein MeCP2 regulates synaptic scaling.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
  18. Review
  19. Transcriptional control of KCNQ channel genes and the regulation of neuronal excitability.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2010
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

S J MyersDepartment of Pharmacology, Emory University, Atlanta, Georgia 30322, USA.
J Peters
Y Huang
M B Comer
F Barthel
R Dingledine
Emory University · USInserm · FRUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand how neurons control the expression of the AMPA receptor subunit GluR2, we cloned the 5' proximal region of the rat gene and investigated GluR2 promoter activity by transient transfection. RNase protection and primer extension of rat brain mRNA revealed multiple transcription initiation sites from -340 to -481 bases upstream of the GluR2 AUG codon. The relative use of 5' start sites was different in cortex and cerebellum, indicating complexity of GluR2 transcript expression among different sets of neurons. When GluR2 promoter activity was investigated by plasmid transfection into cultured cortical neurons, cortical glia, and C6 glioma cells, the promoter construct with the strongest activity, per transfected cell, was 29.4-fold (+/- 3.7) more active in neurons than in non-neural cells. Immunostaining of cortical cultures showed that >97% of the luciferase-positive cells also expressed the neuronal marker MAP-2. Evaluation of internal deletion and substitution mutations identified a functional repressor element I RE1-like silencer and functional Sp1 and nuclear respiratory factor-1 (NRF-1) elements within a GC-rich proximal GluR2 promoter region. The GluR2 silencer reduced promoter activity in glia and non-neuronal cell lines by two- to threefold, was without effect in cortical neurons, and could bind the RE1-silencing transcription factor (REST) because cotransfection of REST into neurons reduced GluR2 promoter activity in a silencer-dependent manner. Substitution of the GluR2 silencer by the homologous NaII RE1 silencer further reduced GluR2 promoter activity in non-neuronal cells by 30-47%. Maximal positive GluR2 promoter activity required both Sp1 and NRF-1 cis elements and an interelement nucleotide bridge sequence. These results indicate that GluR2 transcription initiates from multiple sites, is highly neuronal selective, and is regulated by three regulatory elements in the 5' proximal promoter region.

Indexed as

Promoter Regions, GeneticRegulatory Sequences, Nucleic AcidTranscription, GeneticAnimalsBase SequenceCells, CulturedDNA MethylationGene Expression RegulationGenes, ReporterLuciferasesMolecular Sequence DataNeuronsOrgan SpecificityPeptide Chain Initiation, TranslationalRatsReceptors, AMPALuciferasesReceptors, AMPA

Identifiers

PMID9712644
PMCPMC6792970
OpenAlexW1797028971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.