Evidence map›Paper›PMID 9710605›Full record

ArticleMolecular and cellular biology1998

Control of PKR protein kinase by hepatitis C virus nonstructural 5A protein: molecular mechanisms of kinase regulation.

M Gale, C M Blakely, B Kwieciszewski, S L Tan, M Dossett, N M Tang, M J Korth, S J Polyak, D R Gretch, M G Katze

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 205 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
205citing papers in PubMed, 1 pooled it
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

205 citing papers in PubMed, 1 synthesis or guideline pooled it, 599 citations in OpenAlex.

  1. Pooled it
  2. Interferon signaling and treatment outcome in chronic hepatitis C.Proceedings of the National Academy of Sciences of the United States of America · 2008
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  15. dsRNA-induced condensation of antiviral proteins modulates PKR activity.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  17. Review
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145 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

M GaleDepartment of Microbiology, School of Medicine, University of Washington, Seattle, Washington 98195, USA.
C M Blakely
B Kwieciszewski
S L Tan
M Dossett
N M Tang
M J Korth
S J Polyak
D R Gretch
M G Katze
University of Washington · USPacific Tower · US

Funding

YILMA SIV VACCINIA VACCINE TRIALP51RR000166 · NCRR · UNIVERSITY OF WASHINGTON · PI HU, SHIU-LOK · 1985 to 2011
$161.1M
TRANSLATION CONTROL OF INFLUENZA VIRUS INFECTED CELLSR01AI022646 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 1986 to 2009
$3.4M
HEPATITIS C VIRUS AND INTERFERON--CONTROL OF PKR BY NS5AR01AI041629 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 1997 to 2001
$465k
NCRR NIH HHS P51 RR000166NCRR NIH HHS RR00166NIAID NIH HHS AI22646NIAID NIH HHS AI41629NIAID NIH HHS R01 AI022646
6 · The paper itself

Abstract

The PKR protein kinase is a critical component of the cellular antiviral and antiproliferative responses induced by interferons. Recent evidence indicates that the nonstructural 5A (NS5A) protein of hepatitis C virus (HCV) can repress PKR function in vivo, possibly allowing HCV to escape the antiviral effects of interferon. NS5A presents a unique tool by which to study the molecular mechanisms of PKR regulation in that mutations within a region of NS5A, termed the interferon sensitivity-determining region (ISDR), are associated with sensitivity of HCV to the antiviral effects of interferon. In this study, we investigated the mechanisms of NS5A-mediated PKR regulation and the effect of ISDR mutations on this regulatory process. We observed that the NS5A ISDR, though necessary, was not sufficient for PKR interactions; we found that an additional 26 amino acids (aa) carboxyl to the ISDR were required for NS5A-PKR complex formation. Conversely, we localized NS5A binding to within PKR aa 244 to 296, recently recognized as a PKR dimerization domain. Consistent with this observation, we found that NS5A from interferon-resistant HCV genotype 1b disrupted kinase dimerization in vivo. NS5A-mediated disruption of PKR dimerization resulted in repression of PKR function and inhibition of PKR-mediated eIF-2alpha phosphorylation. Introduction of multiple ISDR mutations abrogated the ability of NS5A to bind to PKR in mammalian cells and to inhibit PKR in a yeast functional assay. These results indicate that mutations within the PKR-binding region of NS5A, including those within the ISDR, can disrupt the NS5A-PKR interaction, possibly rendering HCV sensitive to the antiviral effects of interferon. We propose a model of PKR regulation by NS5A which may have implications for therapeutic strategies against HCV.

Indexed as

AnimalsBase SequenceBinding SitesCloning, MolecularCOS CellsDimerizationDNA PrimerseIF-2 KinaseEscherichia coliGene Expression Regulation, EnzymologicHepacivirusInterferonsModels, BiologicalMolecular Sequence DataMutagenesis, Site-DirectedPoint MutationDNA PrimerseIF-2 KinaseInterferonsNS-5 protein, hepatitis C virusRecombinant ProteinsRNA-Dependent RNA PolymeraseViral Nonstructural Proteins

Identifiers

PMID9710605
PMCPMC109106
OpenAlexW2158697492

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.