Evidence map›Paper›PMID 9705515›Full record

ArticleNucleic acids research1998

The 3' untranslated region of the hsp 70 genes maintains the level of steady state mRNA in Trypanosoma brucei upon heat shock.

M G Lee

Open access · greenAbstract read
In one paragraph

Article in Nucleic acids research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

M G LeeDepartment of Pathology, New York University Medical Center, 550 First Avenue, New York, NY 10016, USA. lee02@mcrcr6.med.nyu.edu
Columbia University Irving Medical Center · US

Funding

TRANSCIPTION OF PROTEIN CODING GENES IN T BRUCEIR01AI028953 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LEE, GWO-SHU MARY · 1999 to 2001
$512k
TRANSCRIPTION OF PROTEIN CODING GENES IN T BRUCEIR21AI028953 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LEE, GWO-SHU MARY · 1997 to 1997
–
TRANSCRIPTION OF THE HSP 70 LOCUS IN T BRUCEIR29AI028953 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LEE, GWO-SHU MARY · 1992 to 1996
–
NIAID NIH HHS AI28953
6 · The paper itself

Abstract

An increase in the transcriptional efficiency at elevated temperatures is a characteristic of transcription of heat shock protein (hsp) coding genes in most eukaryotes analyzed to date. The regulatory mechanism for hsp 70 genes expression in Trypanosoma brucei does not follow the conventional transcriptional induction mechanism. The hsp 70 locus of T.brucei appears in a permanently activated state, and transcriptional induction of hsp 70 genes by heat shock does not occur in this organism. Therefore, the differential expression of the hsp 70 genes in trypanosomes is, to a large extent, post-transcriptionally controlled. Mechanisms of post-transcriptional control of the hsp 70 gene expression were investigated. Procyclic trypanosomes were normally maintained at approximately 25 degreesC. Incubation of procyclic trypanosomes at 41 degreesC drastically reduced the steady state mRNA levels of many protein coding genes. In contrast, the expression of the hsp 70 genes is either maintained at a high level or is up-regulated. The hsp 70 intergenic region promoter together with its 3' splice acceptor sites and the 5' untranslated region (UTR) are not sufficient to maintain or up-regulate the mRNA level of a reporter gene upon heat shock. However, addition of the 3' UTR of hsp 70 genes to a reporter gene, driven by different promoters, maintained a high level expression of the mRNA during heat shock. These results suggested that the 3' UTR of the hsp 70 genes is primarily responsible for the maintenance of mRNA level during heat shock, while mRNA containing the 3' UTR from many other genes may be rapidly degraded by heat shock induced processes.

Indexed as

RNA Processing, Post-TranscriptionalAnimalsBase SequenceCell LineGenes, ReporterHeat-Shock ResponseHot TemperatureHSP70 Heat-Shock ProteinsMolecular Sequence DataPhosphotransferases (Alcohol Group Acceptor)RNA, MessengerRNA, ProtozoanTranscription, GeneticTransformation, GeneticTrypanosoma brucei bruceiUp-RegulationHSP70 Heat-Shock Proteinshygromycin-B kinasePhosphotransferases (Alcohol Group Acceptor)RNA, MessengerRNA, Protozoan

Identifiers

PMID9705515
PMCPMC147808
OpenAlexW2108256794

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.