Evidence map›Paper›PMID 9705508›Full record

ArticleNucleic acids research1998

Mutations in the yeast Myb-like protein Bas1p resulting in discrimination between promoters in vivo but notin vitro.

B Pinson, I Sagot, F Borne, O S Gabrielsen, B Daignan-Fornier

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

B PinsonInstitut de Biochimie et Génétique Cellulaires, CNRS UPR9026, 1 rue Camille Saint-Saëns, F-33077 Bordeaux Cedex, France.
I Sagot
F Borne
O S Gabrielsen
B Daignan-Fornier
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bas1p is a yeast transcription factor that activates expression of purine and histidine biosynthesis genes in response to extracellular purine limitation. The N-terminal part of Bas1p contains an Myb-like DNA binding domain composed of three tryptophan-rich imperfect repeats. We show that mutating the conserved tryptophan residues in the DNA binding domain of Bas1p severely impairs in vivo activation of target genes and in vitro DNA binding of Bas1p. We also found that two mutations (H34L and W42A) in the first repeat make Bas1p discriminate between promoters in vivo . These two BAS1 mutants are able to activate expression of an HIS4-lacZ fusion but not that of ADE1-lacZ or ADE17-lacZ fusions. Surprisingly, these mutant proteins bind equally well to the three promoters in vitro , suggesting that the mutations affect the interaction of Bas1p with some promoter-specific factor(s) in vivo . By mutating a potential nucleotide binding site in the DNA binding domain of Bas1p, we also show that this motif does not play a major role in purine regulation of Bas1p activity. Finally, using a green fluorescence protein (GFP)-Bas1p fusion, we establish the strict nuclear localization of Bas1p and show that it is not affected by extracellular adenine.

Indexed as

Gene Expression Regulation, FungalPromoter Regions, GeneticSaccharomyces cerevisiae ProteinsAdenineAmino Acid SequenceBinding SitesCell CompartmentationCell NucleusConserved SequenceFungal ProteinsGenes, ReporterHistidineMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingProto-Oncogene ProteinsAdenineBAS1 protein, S cerevisiaeFungal ProteinsHistidineProto-Oncogene ProteinsProto-Oncogene Proteins c-mybSaccharomyces cerevisiae ProteinsTrans-ActivatorsTryptophan

Identifiers

PMID9705508
PMCPMC147816
OpenAlexW2106584304

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.