Evidence map›Paper›PMID 9687514›Full record

ArticleThe EMBO journal1998

TAFII-independent activation mediated by human TBP in the presence of the positive cofactor PC4.

S Y Wu, E Kershnar, C M Chiang

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S Y WuDepartment of Biochemistry, University of Illinois, Urbana 61801, USA.
E Kershnar
C M Chiang
University of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TFIID is a multiprotein complex comprised of the TATA-binding protein (TBP) and an array of TBP-associated factors (TAFIIs). Whereas TBP is sufficient for basal transcription in conjunction with other general transcription factors and RNA polymerase II, TAFIIs are additionally required for activator-dependent transcription in mammalian cell-free transcription systems. However, recent in vivo studies carried out in yeast suggest that TAFIIs are not globally required for activator function. The discrepancy between in vivo yeast studies and in vitro mammalian cell-free systems remains to be resolved. In this study, we describe a mammalian cell-free transcription system reconstituted with only recombinant proteins and epitope-tagged multiprotein complexes. Transcriptional activation can be recapitulated in this highly purified in vitro transcription system in the absence of TAFIIs. This TBP-mediated activation is not induced by human mediator, another transcriptional coactivator complex potentially implicated in activator response. In contrast, general transcription factors TFIIH and TFIIA play a significant role in TBP-mediated activation, which can be detected in vitro with Gal4 fusion proteins containing various transcriptional activation domains. Our data, therefore, suggest that TFIIH and TFIIA can mediate activator function in the absence of TAFIIs.

Indexed as

Transcriptional ActivationCell FractionationDNA-Binding ProteinsDrug SynergismFungal ProteinsHeLa CellsHerpes Simplex Virus Protein Vmw65HumansMembrane ProteinsRecombinant Fusion ProteinsRegulatory Sequences, Nucleic AcidTATA BoxTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsTranscription Factors, TFIIDNA-Binding ProteinsFungal ProteinsGal-VP16Herpes Simplex Virus Protein Vmw65Membrane ProteinsRecombinant Fusion ProteinsSUB1 protein, humanTATA-Box Binding ProteinTrans-ActivatorsTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIATranscription Factor TFIIDtranscription factor TFIIEtranscription factor TFIIFTranscription Factor TFIIH

Identifiers

PMID9687514
PMCPMC1170779
OpenAlexW2062796383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.