Evidence map›Paper›PMID 9675214›Full record

ArticleBiophysical journal1998

Interferometric fringe fluorescence photobleaching recovery interrogates entire cell surfaces.

H M Munnelly, D A Roess, W F Wade, B G Barisas

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

H M MunnellyDepartment of Chemistry, Colorado State University, Fort Collins, Colorado 80523, USA. barisas@lamar.colostate.edu
D A Roess
W F Wade
B G Barisas
Colorado State University · US

Funding

MEMBRANE DYNAMICS AND FUNCTION OF MHC CLASS II MUTANTSR01AI036306 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI BARISAS, B GEORGE · 1994 to 1998
–
NIAID NIH HHS AI36306
6 · The paper itself

Abstract

Fluorescence photobleaching recovery (FPR) measurements of cell surface protein lateral diffusion typically employ an interrogated spot of 0.5 microm 1/e2 radius. The effective spot area represents only 1/500 of the total surface of an 8-microm cell. An FPR measurement of a protein expressed as 50,000 copies per cell reflects the dynamics of 100 molecules. This limits the precision and reproducibility of FPR measurements. We describe a method for interferometric fringe pattern FPR that permits simultaneous interrogation of the entire cell's surface. Fringe patterns are generated interferometrically within the optical path of an FPR system. Methods for interpreting fluorescence recovery kinetics on cells and for determining the protein mobile fraction are presented. With fringe FPR, the murine major histocompatibility complex class II antigen I-Ak expressed on M12.C3.F6 cells has 100-fold improved fluorescence signals relative to spot FPR, with corresponding improvements in signal-to-noise ratios of recovery traces. Diffusion coefficients (+/- standard deviation) of (2.1 +/- 0.4) x 10(-10) and (1.8 +/- 1.0) x 10(-10) cm2 s-1 with corresponding mobile fractions of I-Ak of 66.1 +/- 7.8% and 63.4 +/- 18.0% were obtained by fringe and spot methods, respectively. The improved reproducibility of fringe over spot results is less than signal improvements predict. There may thus be substantial variation from cell to cell in protein dynamics, and this method may permit the assessment of such variation.

Indexed as

AnimalsCardiolipinsCell LineCholesterolDiffusionEquipment DesignHistocompatibility Antigens Class IIKineticsLiposomesMiceMicroscopy, InterferenceModels, TheoreticalPhosphatidylcholinesRecombinant ProteinsReproducibility of ResultsSensitivity and SpecificityCardiolipinsCholesterolHistocompatibility Antigens Class IILiposomesPhosphatidylcholinesRecombinant Proteins

Identifiers

PMID9675214
PMCPMC1299787
OpenAlexW2087440452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.