Evidence map›Paper›PMID 9670037›Full record

ArticleThe Journal of experimental medicine1998

T cell receptor (TCR) engagement leads to activation-induced splicing of tumor necrosis factor (TNF) nuclear pre-mRNA.

Y Yang, J F Chang, J R Parnes, C G Fathman

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Article
  7. Article
  8. Polyfunctional and IFN-JCI insight · 2017
    Article
  9. Noncoding RNAs and LRRFIP1 regulate TNF expression.Journal of immunology (Baltimore, Md. : 1950) · 2014
    Article
  10. Article
  11. Article
  12. Beryllium-induced TNF-alpha production is transcription-dependent in chronic beryllium disease.American journal of respiratory cell and molecular biology · 2007
    Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Y YangStanford University School of Medicine, Department of Medicine, Division of Immunology and Rheumatology, Stanford, California 94305-5111, USA.
J F Chang
J R Parnes
C G Fathman
Stanford University · US

Funding

TERNARY COMPLEX THAT DRIVES T-CELL ACTIVATIONR01CA065237 · NCI · STANFORD UNIVERSITY · PI FATHMAN, CHARLES GARRISON · 1994 to 2013
$3.2M
THE LEU-2/T8 T CELL DIFFERENTIATION ANTIGEN GENER01GM034991 · NIGMS · STANFORD UNIVERSITY · PI PARNES, JANE R · 1986 to 1999
–
NCI NIH HHS CA65237NCI NIH HHS R01 CA065237NIGMS NIH HHS GM34991
6 · The paper itself

Abstract

Inducible gene expression is primarily regulated at the level of transcription. Additional steps of "processing" pre-mRNA, involved in the regulation of induced gene expression, have not been previously reported. Here we report a novel mechanism of "activation-induced splicing" of preexisting tumor necrosis factor (TNF) message (pre-mRNA) in naive T lymphocytes after engagement of the T cell receptor (TCR), which still occurs after inhibition of transcription. Expression of TNF has been previously demonstrated to be regulated at both the transcriptional and translational levels. However, neither the large pool of TNF mRNA observed in activated T cells nor TNF protein production, which peaks very shortly after activation, can be solely attributed to increased transcription. Evidence is presented that activation-induced splicing of TNF pre-mRNA plays a significant role in the rapid production of TNF seen in activated T cells. Activation triggers processing of TNF pre-mRNA that has accumulated in naive T cells (before activation-induced transcription), and the mature TNF mRNA is translocated to the cytoplasm for rapid translation and protein production. This novel form of activation-induced splicing of TNF may allow T cells to mount an immediate response to activation stimuli under physiological conditions.

Indexed as

AnimalsGene Expression RegulationLymphocyte ActivationMiceMice, Inbred BALB CReceptors, Antigen, T-CellRNA PrecursorsRNA SplicingT-LymphocytesTranscription, GeneticTumor Necrosis Factor-alphaReceptors, Antigen, T-CellRNA PrecursorsTumor Necrosis Factor-alpha

Identifiers

PMID9670037
PMCPMC2212449
OpenAlexW2135366992

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.