Evidence map›Paper›PMID 9666006›Full record

ArticleJournal of clinical microbiology1998

5' nuclease PCR assay to detect Yersinia pestis.

J A Higgins, J Ezzell, B J Hinnebusch, M Shipley, E A Henchal, M S Ibrahim

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Multiplex PCR System for the Diagnosis of Plague.Current molecular medicine · 2025
    Review
  3. Review
  4. Biomolecules · 2020
    Review
  5. Human plague: An old scourge that needs new answers.PLoS neglected tropical diseases · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Simultaneous real-time PCR detection of Bacillus anthracis, Francisella tularensis and Yersinia pestis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2007
    Article
  14. Rapid quantitative detection ofSensors and actuators. B, Chemical · 2006
    Article
  15. Article
  16. Article
  17. Review
  18. Detection of Yersinia pestis in sputum by real-time PCR.Journal of clinical microbiology · 2003
    Article
  19. Real-time PCR assay to detect smallpox virus.Journal of clinical microbiology · 2003
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

J A HigginsDiagnostic Systems Division, United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Maryland 21702-5011, USA.
J Ezzell
B J Hinnebusch
M Shipley
E A Henchal
M S Ibrahim
United States Army Medical Research Institute of Infectious Diseases · USNational Institute of Allergy and Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 5' nuclease PCR assay uses a fluorescently labeled oligonucleotide probe (TaqMan) to rapidly detect and quantitate DNA templates in clinical samples. We developed a 5' nuclease PCR assay targeting the plasminogen activator gene (pla) of Yersinia pestis. The assay is species specific, with a detection threshold of 2.1 x 10(5) copies of the pla target or 1.6 pg of total cell DNA. The assay detected Y. pestis in experimentally infected Xenopsylla cheopis fleas and in experimentally infected monkey blood and oropharyngeal swabs. The TaqMan assay is simple to perform and rapid and shows promise as a future field-adaptable technique.

Indexed as

Bacterial ProteinsAnimalsBloodChlorocebus aethiopsDeoxyribonucleasesDNA PrimersFluorescent DyesOligonucleotide ProbesOropharynxPlaguePlasminogen ActivatorsPolymerase Chain ReactionSensitivity and SpecificitySiphonapteraTaq PolymeraseYersinia pestisBacterial ProteinsDeoxyribonucleasesDNA PrimersFluorescent DyesOligonucleotide ProbesPla protease, Yersinia pestisPlasminogen ActivatorsTaq Polymerase

Identifiers

PMID9666006
PMCPMC105032
OpenAlexW1516313654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.