Evidence map›Paper›PMID 9647638›Full record

ArticleGenome research1998

Physical map of human 6p21.2-6p21.3: region flanking the centromeric end of the major histocompatibility complex.

N Tripodis, R Mason, S J Humphray, A F Davies, J A Herberg, J Trowsdale, D Nizetic, G Senger, J Ragoussis

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 38 citations in OpenAlex.

  1. The immunogenetics of COVID-19.Immunogenetics · 2023
    Review
  2. Review
  3. Article
  4. Glyoxalase System in the Progression of Skin Aging and Skin Malignancies.International journal of molecular sciences · 2020
    Review
  5. Article
  6. Review
  7. Genetic of uveitis.International ophthalmology · 2016
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

N TripodisDivision of Medical and Molecular Genetics, United Medical and Dental School of Guy's and St. Thomas', Guy's Hospital, London SE1 9RT, UK.
R Mason
S J Humphray
A F Davies
J A Herberg
J Trowsdale
D Nizetic
G Senger
J Ragoussis
University of London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

We have physically mapped and cloned a 2.5-Mb chromosomal segment flanking the centromeric end of the major histocompatibility complex (MHC). We characterized in detail 27 YACs, 144 cosmids, 51 PACs, and 5 BACs, which will facilitate the complete genomic sequencing of this region of chromosome 6. The contig contains the genes encoding CSBP, p21, HSU09564 serine kinase, ZNF76, TCP-11, RPS10, HMGI(Y), BAK, and the human homolog of Tctex-7 (HSET). The GLO1 gene was mapped further centromeric in the 6p21.2-6p21.1 region toward TCTE-1. The gene order of the GLO1-HMGI(Y) segment in respect to the centromere is similar to the gene order in the mouse t-chromosome distal inversion, indicating that there is conservation in gene content but not gene order between humans and mice in this region. The close linkage of the BAK and CSBP genes to the MHC is of interest because of their possible involvement in autoimmune disease.

Indexed as

Bacterial ProteinsPhysical Chromosome MappingBacteriophagesCentromereChromosomes, Artificial, YeastChromosomes, BacterialChromosomes, Human, Pair 6Contig MappingCosmidsDeoxyribonuclease EcoRIDeoxyribonucleases, Type II Site-SpecificElectrophoresis, Gel, Pulsed-FieldHumansIn Situ Hybridization, FluorescenceMajor Histocompatibility ComplexBacterial ProteinsDeoxyribonuclease EcoRIDeoxyribonucleases, Type II Site-Specificendodeoxyribonuclease BSSHIIendodeoxyribonuclease MluI

Identifiers

PMID9647638
PMCPMC310739
OpenAlexW2127380621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.