Evidence map›Paper›PMID 9634510›Full record

ArticleAmerican journal of human genetics1998

Mapping of complex traits by single-nucleotide polymorphisms.

L P Zhao, C Aragaki, L Hsu, F Quiaoit

Abstract read
In one paragraph

Article in American journal of human genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. A gene frequency model for QTL mapping using Bayesian inference.Genetics, selection, evolution : GSE · 2010
    Article
  2. Article
  3. Association testing in a linked region using large pedigrees.American journal of human genetics · 2005
    Article
  4. The future of genetic testing for drug response.Dialogues in clinical neuroscience · 2004
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

L P ZhaoQuantitative Genetic Epidemiology Group, Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA. lzhao@fhcrc.org
C Aragaki
L Hsu
F Quiaoit

Funding

VALIDATION OF A DIET HISTORY METHOD FOR EPIDEMIOLOGIC STUDIES OF CANCERP01CA033619 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N. · 1985 to 2010
$18.5M
STATISTICAL METHODS FOR STUDIES ON DIET AND CANCERR01CA064046 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ZHAO, LUE PING NA · 1993 to 1996
–
STATISTICAL METHODS FOR GENETIC EPIDEMIOLOGY OF CANCERR29CA055670 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI ZHAO, LUE PING NA · 1992 to 1996
–
NCI NIH HHS CA-33619NCI NIH HHS CA55670NCI NIH HHS CA64046
6 · The paper itself

Abstract

Molecular geneticists are developing the third-generation human genome map with single-nucleotide polymorphisms (SNPs), which can be assayed via chip-based microarrays. One use of these SNP markers is the ability to locate loci that may be responsible for complex traits, via linkage/linkage-disequilibrium analysis. In this communication, we describe a semiparametric method for combined linkage/linkage-disequilibrium analysis using SNP markers. Asymptotic results are obtained for the estimated parameters, and the finite-sample properties are evaluated via a simulation study. We also applied this technique to a simulated genome-scan experiment for mapping a complex trait with two major genes. This experiment shows that separate linkage and linkage-disequilibrium analyses correctly detected the signals of both major genes; but the rates of false-positive signals seem high. When linkage and linkage-disequilibrium signals were combined, the analysis yielded much stronger and clearer signals for the presence of two major genes than did two separate analyses.

Indexed as

Biosensing TechniquesChromosome MappingGenetic Diseases, InbornGenetic LinkageGenetic MarkersGenome, HumanGenotypeHumansLinkage DisequilibriumModels, GeneticNucleotidesPedigreePolymorphism, GeneticGenetic MarkersNucleotides

Identifiers

PMID9634510
PMCPMC1377233

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.