Evidence map›Paper›PMID 9632777›Full record

ArticleMolecular and cellular biology1998

Simian virus 40 large T antigen stabilizes the TATA-binding protein-TFIIA complex on the TATA element.

B Damania, P Lieberman, J C Alwine

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

B DamaniaGraduate Group of Cell and Molecular Biology, Department of Microbiology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104-6142, USA.
P Lieberman
J C Alwine
University of Pennsylvania · USThe Wistar Institute · US

Funding

REGULATION OF DNA TUMOR VIRUS GENE EXPRESSIONR01CA028379 · NCI · UNIVERSITY OF PENNSYLVANIA · PI ALWINE, JAMES C · 1985 to 2009
$4.5M
NCI NIH HHS CA28379NCI NIH HHS R01 CA028379
6 · The paper itself

Abstract

Large T antigen (T antigen), the early gene product of simian virus 40 (SV40), is a potent transcriptional activator of both cellular and viral genes. Recently we have shown that T antigen is tightly associated with TFIID and, in this position, performs a TATA-binding protein (TBP)-associated factor (TAF)-like function. Based on this observation, we asked whether T antigen affected steps in preinitiation complex assembly. Using purified components in in vitro complex assembly assays, we found that T antigen specifically enhances the formation of the TBP-TFIIA complex on the TATA element. T antigen accomplishes this by increasing the rate of formation of the TBP-TFIIA complex on the TATA element and by stabilizing the complexes after they are formed on the promoter. In addition, DNA immunoprecipitation experiments indicate that T antigen is associated with the stabilized TBP-TFIIA complexes bound to the DNA. In this regard, it has previously been shown that T antigen interacts with TBP; in the present study, we show that T antigen also interacts with TFIIA in vitro. In testing the ability of T antigen to stabilize the TBP-TFIIA complex, we found that stabilization is highly sensitive to the specific sequence context of the TATA element. Previous studies showed that T antigen could activate simple promoters containing the TATA elements from the hsp70 and c-fos gene promoters but failed to significantly activate similar promoters containing the TATA elements from the promoters of the SV40 early and adenovirus E2a genes. We find that the ability to stabilize the TBP-TFIIA complex on the hsp70 and c-fos TATA elements, and not on the SV40 early and E2A TATA elements, correlates with the ability or inability to activate promoters containing these TATA elements.

Indexed as

TATA BoxAdenovirus E2 ProteinsAnimalsAntigens, Polyomavirus TransformingBinding SitesCell LineChlorocebus aethiopsDeoxyribonuclease IDNA-Binding ProteinsDNA FootprintingHeLa CellsHSP70 Heat-Shock ProteinsHumansPrecipitin TestsPromoter Regions, GeneticProto-Oncogene Proteins c-fosAdenovirus E2 ProteinsAntigens, Polyomavirus TransformingDeoxyribonuclease IDNA-Binding ProteinsHSP70 Heat-Shock ProteinsProto-Oncogene Proteins c-fosTATA-Box Binding ProteinTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIATranscription Factor TFIIBTranscription Factor TFIID

Identifiers

PMID9632777
PMCPMC108977
OpenAlexW2171158788

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.