Evidence map›Paper›PMID 9620858›Full record

ArticleGenes & development1998

Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching.

C Wu, K Weiss, C Yang, M A Harris, B K Tye, C S Newlon, R T Simpson, J E Haber

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

  1. On the evolution of variation in sexual reproduction through the prism of eukaryotic microbes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Review
  2. Article
  3. Article
  4. Article
  5. Chromosome-refolding model of mating-type switching in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  6. Article
  7. Review
  8. Article
  9. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  10. Article
  11. The evolution of sex: a perspective from the fungal kingdom.Microbiology and molecular biology reviews : MMBR · 2010
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

C WuRosenstiel Center and Department of Biology, Brandeis University, Waltham, Massachusetts 02254-9110 USA.
K Weiss
C Yang
M A Harris
B K Tye
C S Newlon
R T Simpson
J E Haber
Cornell University · USRutgers, The State University of New Jersey · US

Funding

Recombination Mechanisms in Yeast Cell DifferentiationR37GM020056 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 2007 to 2016
$5.5M
DNA REPLICATION IN SACCHAROMYCES CEREVISIAER01GM035679 · NIGMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI NEWLON, CAROL S. · 1985 to 2006
$4.3M
RECOMBINATION MECHANISMS IN YEAST CELL DIFFERENTIATIONR01GM020056 · NIGMS · BRANDEIS UNIVERSITY · PI HABER, JAMES E · 1985 to 2006
$3.4M
MOLECULAR MECHANISMS OF TRANSCRIPTIONAL REPRESSIONR01GM052311 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI SCHLEGEL, ROBERT A · 1996 to 2003
$1.1M
NIGMS NIH HHS GM20056NIGMS NIH HHS GM35679NIGMS NIH HHS GM 52311NIGMS NIH HHS R01 GM020056NIGMS NIH HHS R01 GM035679NIGMS NIH HHS R01 GM052311NIGMS NIH HHS R37 GM020056
6 · The paper itself

Abstract

Switching of Saccharomyces mating type by replacement of sequences at the MAT locus involves a choice between two donors, HML and HMR. MATalpha cells inhibit recombination along the entire left arm of chromosome III, including HML, whereas MATa cells activate this same region. MATa-dependent activation of HML depends on a small, cis-acting DNA sequence designated the recombination enhancer (RE), located 17 kb centromere-proximal to HML. A comparison of RE sequences interchangeable between Saccharomyces cerevisiae and Saccharomyces carlsbergensis defines a minimum RE of 244 bp. RE activity is repressed in MATalpha cells by binding of the Matalpha2-Mcm1 corepressor to a site within the RE. Mutation of the two Matalpha2 binding sites removes most, but not all, of this repression, and RE chromatin structure in MATalpha cells becomes indistinguishable from that seen in MATa. Surprisingly, a 2-bp mutation in the Mcm1 binding site completely abolishes RE activity in MATa cells; moreover, RE chromatin structure in the MATa mutant becomes very similar to that seen in MATalpha cells with a normal RE, displaying highly ordered nucleosomes despite the absence of Matalpha2. Further, a mutation that alters the ability of Mcm1 to act with Matalpha2 in repressing a-specific genes also alters donor preference in either mating type. Thus, Mcm1 is critically responsible for the activation as well as the Matalpha2-Mcm1-mediated repression of RE activity.

Indexed as

Gene Expression Regulation, FungalGenes, FungalGenes, Mating Type, FungalRecombination, GeneticBase SequenceDNA-Binding ProteinsDNA, FungalFungal ProteinsMinichromosome Maintenance 1 ProteinMolecular Sequence DataSaccharomyces cerevisiaeSequence AlignmentTranscription FactorsDNA-Binding ProteinsDNA, FungalFungal ProteinsMinichromosome Maintenance 1 ProteinTranscription Factors

Identifiers

PMID9620858
PMCPMC316872
OpenAlexW2088509114

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.