Evidence map›Paper›PMID 9614173›Full record

ArticleMolecular biology of the cell1998

Immunoisolation and characterization of a subdomain of the endoplasmic reticulum that concentrates proteins involved in COPII vesicle biogenesis.

T C Hobman, B Zhao, H Chan, M G Farquhar

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Regulation of ER-Golgi Transport Dynamics by GTPases in Budding Yeast.Frontiers in cell and developmental biology · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

T C HobmanDepartment of Cell Biology and Anatomy, University of Alberta, Edmonton, Alberta, Canada T6G 2H7.
B Zhao
H Chan
M G Farquhar
University of Alberta · CAUniversity of California San Diego · US

Funding

SECRETION AND GOLGI TRAFFIC IN PITUITARY AND OTHER CELLSR01DK017780 · NIDDK · YALE UNIVERSITY · PI FARQUHAR, MARILYN GIST · 1986 to 2010
$3.7M
SECRETION AND GOLGI TRAFFIC IN PITUITARY AND OTHER CELLSR37DK017780 · NIDDK · YALE UNIVERSITY · PI FARQUHAR, MARILYN GIST · 1988 to 1995
–
NIDDK NIH HHS DK-17780NIDDK NIH HHS R01 DK017780
6 · The paper itself

Abstract

Rubella virus E1 glycoprotein normally complexes with E2 in the endoplasmic reticulum (ER) to form a heterodimer that is transported to and retained in the Golgi complex. In a previous study, we showed that in the absence of E2, unassembled E1 subunits accumulate in a tubular pre-Golgi compartment whose morphology and biochemical properties are distinct from both rough ER and Golgi. We hypothesized that this compartment corresponds to hypertrophied ER exit sites that have expanded in response to overexpression of E1. In the present study we constructed BHK cells stably expressing E1 protein containing a cytoplasmically disposed epitope and isolated the pre-Golgi compartment from these cells by cell fractionation and immunoisolation. Double label indirect immunofluorescence in cells and immunoblotting of immunoisolated tubular networks revealed that proteins involved in formation of ER-derived transport vesicles, namely p58/ERGIC 53, Sec23p, and Sec13p, were concentrated in the E1-containing pre-Golgi compartment. Furthermore, budding structures were evident in these membrane profiles, and a highly abundant but unknown 65-kDa protein was also present. By comparison, marker proteins of the rough ER, Golgi, and COPI vesicles were not enriched in these membranes. These results demonstrate that the composition of the tubular networks corresponds to that expected of ER exit sites. Accordingly, we propose the name SEREC (smooth ER exit compartment) for this structure.

Indexed as

Mannose-Binding LectinsSaccharomyces cerevisiae ProteinsAnimalsBinding SitesCell LineCoated VesiclesCOP-Coated VesiclesCricetinaeEndoplasmic Reticulum, RoughFungal ProteinsGolgi ApparatusGTPase-Activating ProteinsIntracellular MembranesMembrane ProteinsMutagenesisNuclear Pore Complex ProteinsE1 envelope protein, Rubella virusFungal ProteinsGTPase-Activating ProteinsMannose-Binding LectinsMembrane ProteinsNuclear Pore Complex ProteinsSaccharomyces cerevisiae ProteinsSEC13 protein, S cerevisiaeSEC23 protein, S cerevisiaeViral Envelope Proteins

Identifiers

PMID9614173
PMCPMC25349
OpenAlexW2113776812

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.