Evidence map›Paper›PMID 9608728›Full record

ArticleProceedings. Biological sciences1998

Identification of Ca(2+)-activated K+ channel splice variants and their distribution in the turtle cochlea.

E M Jones, C Laus, R Fettiplace

Open access · greenAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

  1. The mechanism of CaThe Journal of biological chemistry · 2025
    Article
  2. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
  3. Review
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  9. Review
  10. Ion channel gene expression in the inner ear.Journal of the Association for Research in Otolaryngology : JARO · 2007
    Article
  11. Alternative splicing of the Ca(v)1.3 channel IQ domain, a molecular switch for Ca2+-dependent inactivation within auditory hair cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2006
    Article
  12. Article
  13. Article
  14. The distribution of calcium buffering proteins in the turtle cochlea.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2003
    Article
  15. Article
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  19. beta subunits modulate alternatively spliced, large conductance, calcium-activated potassium channels of avian hair cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2000
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

E M JonesDepartment of Physiology, University of Wisconsin Medical School, Madison 53706, USA.
C Laus
R Fettiplace
University of Wisconsin–Madison · US

Funding

INTRACELLULAR CALCIUM IN HAIR CELLSR01DC001362 · NIDCD · UNIVERSITY OF WISCONSIN-MADISON · PI ROBERT FETTIPLACE · 1992 to 2026
$11.3M
NIDCD NIH HHS R01 DC 01362
6 · The paper itself

Abstract

Turtle auditory-hair cells are frequency-tuned by the activity of calcium-activated potassium (KCa) channels, a cell's characteristic frequency being determined by the KCa channel density and kinetics which both vary systematically along the cochlea. As a first step towards identifying the source of KCa channel variation, we have isolated, by reverse-transcription polymerase chain reaction on dissociated hair cells, the main cDNAs homologous to the slo gene which encodes the channel's alpha-subunit. A total of six alternatively spliced variants were identified, the smallest of which is 94% identical to a mouse Slo sequence. Variation occurs by insertion of exons at only two splice sites, two of these exons encoding novel 31- and 61-amino acid sequences. As we were unable to detect splicing at other potential sites, we infer that the six variants correspond to naturally occurring combinations. The spatial distribution of the variants, defined by isolating hair cells from different regions of the cochlea, indicated that some isoforms were non-uniformly distributed. Those containing large inserts in the first splice site were notably absent from the highest-frequency region. We suggest that alternative splicing of the slo gene may contribute to variation in KCa channel properties.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsCalciumCochleaHair Cells, AuditoryIon Channel GatingMiceMolecular Sequence DataPotassium ChannelsTurtlesCalciumPotassium Channels

Identifiers

PMID9608728
PMCPMC1689023
OpenAlexW2017487573

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.