Evidence map›Paper›PMID 9604756›Full record

ArticleJournal of assisted reproduction and genetics1998

Allele dropout in polar bodies and blastomeres.

S Rechitsky, C Strom, O Verlinsky, T Amet, V Ivakhnenko, V Kukharenko, A Kuliev, Y Verlinsky

Open access · bronzeAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
16.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 145 citations in OpenAlex.

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  13. Whole genome amplification in preimplantation genetic diagnosis.Journal of Zhejiang University. Science. B · 2011
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Preimplantation genetic diagnosis: present and future.Journal of assisted reproduction and genetics · 2007
    Review
  19. Article
  20. Molecular diagnostics in preimplantation genetic diagnosis.The Journal of molecular diagnostics : JMD · 2002
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

S RechitskyReproductive Genetics Institute, Chicago, Illinois 60657, USA.
C Strom
O Verlinsky
T Amet
V Ivakhnenko
V Kukharenko
A Kuliev
Y Verlinsky
Reproductive Genetics Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeBecause allele dropout (ADO) is frequently observed in single-cell polymerase chain reaction analysis, it is important to develop a method for efficient detection of ADO, in order to avoid possible misdiagnosis in preimplantation diagnosis.

methodsWe introduced a simultaneous amplification of mutant genes and linked polymorphic markers, such as a 4-bp repeat (GATT) at the 3' end of intron 6 in the cystic fibrosis (CF) gene and a short tandem repeat at the 5' end of the beta-globin gene. Three types of single heterozygous cells were studied for the amplification of both alleles, including 150 blastomeres, 1615 fibroblasts, and 170 first polar bodies, obtained from patients at risk for having children with cystic fibrosis (delta F-508 mutation) or sickle cell disease.

resultsADO rates of as high as 33.3% for delta F-508 mutation and 22.8% for beta-globin gene were observed in single blastomeres, compared to 7.1 and 7.7% in single fibroblasts and 5.9 and 9.6% in first polar bodies, respectively. The application of simultaneous amplification of the above linked polymorphic markers allowed detection of more than half of the cases of ADO in blastomeres (19.4% for cystic fibrosis and 12.3% for beta-globin gene) and almost all ADOs in polar bodies, particularly when the two-step sequential analysis of the first and second polar body was applied in preimplantation diagnosis of single gene disorders.

conclusionsSimultaneous amplification of linked polymorphic markers in single-cell DNA analysis of single-gene defects is an efficient method for avoiding the risk of misdiagnosis in preimplantation diagnosis.

Indexed as

AllelesAnemia, Sickle CellBlastomeresCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorDNA ProbesFemaleFibroblastsGlobinsHumansPolymerase Chain ReactionPreimplantation DiagnosisCFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorDNA ProbesGlobins

Identifiers

PMID9604756
PMCPMC3454764
OpenAlexW170122044

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.